RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TBC1D5Q92609 795 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 PIGSQ96S52 555 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 SYNRGQ9UMZ2 1314 aa17.85■□□□□ 0.45
CPSF1-210ENST00000532935 ADAMTS4O75173 837 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 CALM1P0DP23 149 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 CALM2P0DP24 149 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 CALM3P0DP25 149 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 LRRC26Q2I0M4 334 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 RNF180Q86T96 592 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 MCF2L2Q86YR7 1114 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 FBXO16Q8IX29 292 aaPredicted RBP17.84■□□□□ 0.45
CPSF1-210ENST00000532935 C7orf61Q8IZ16 206 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 DNERQ8NFT8 737 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 PCDHA1Q9Y5I3 950 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 SLC12A7Q9Y666 1083 aa17.84■□□□□ 0.45
CPSF1-210ENST00000532935 HMGB1P09429 215 aaKnown RBP17.83■□□□□ 0.44
CPSF1-210ENST00000532935 RXRAP19793 462 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 GNAQP50148 359 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 TRAF1Q13077 416 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 SYTL5Q8TDW5 730 aaPredicted RBP17.83■□□□□ 0.44
CPSF1-210ENST00000532935 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 VTA1Q9NP79 307 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 SNX14Q9Y5W7 946 aa17.83■□□□□ 0.44
CPSF1-210ENST00000532935 PNMA6FA0A0J9YX94 578 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-210ENST00000532935 OPLAHO14841 1288 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 ADCYAP1R1P41586 468 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 ATN1P54259 1190 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-210ENST00000532935 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 RAB11FIP4Q86YS3 637 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 KLHDC9Q8NEP7 349 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 JAKMIP1Q96N16 626 aaKnown RBP17.82■□□□□ 0.44
CPSF1-210ENST00000532935 MPHOSPH6Q99547 160 aaKnown RBP17.82■□□□□ 0.44
CPSF1-210ENST00000532935 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 UPF3AQ9H1J1 476 aaKnown RBP17.82■□□□□ 0.44
CPSF1-210ENST00000532935 PDGFCQ9NRA1 345 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 PHF24Q9UPV7 400 aa17.82■□□□□ 0.44
CPSF1-210ENST00000532935 RANBP2P49792 3224 aaKnown RBP17.81■□□□□ 0.44
CPSF1-210ENST00000532935 EPB41L2O43491 1005 aaKnown RBP17.81■□□□□ 0.44
CPSF1-210ENST00000532935 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 CFBP00751 764 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 EDNRBP24530 442 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 GJA9P57773 515 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 PDE4DQ08499 809 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 IQSEC1Q6DN90 963 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 SYNE3Q6ZMZ3 975 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 NOL8Q76FK4 1167 aaKnown RBP17.81■□□□□ 0.44
CPSF1-210ENST00000532935 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 SRBD1Q8N5C6 995 aaKnown RBP17.81■□□□□ 0.44
CPSF1-210ENST00000532935 FANCBQ8NB91 859 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 PIBF1Q8WXW3 757 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
CPSF1-210ENST00000532935 SPC25Q9HBM1 224 aa17.81■□□□□ 0.44
CPSF1-210ENST00000532935 MYADML2A6NDP7 307 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 B4DLN1 442 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 SMPD1P17405 629 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 CST5P28325 142 aaPredicted RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 HSD17B4P51659 736 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 GHRHRQ02643 423 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 APOA5Q6Q788 366 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 SLC39A5Q6ZMH5 540 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 CMTR1Q8N1G2 835 aaKnown RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 NSUN6Q8TEA1 469 aaKnown RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 RRP36Q96EU6 259 aaKnown RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 TAAR1Q96RJ0 339 aa17.8■□□□□ 0.44
CPSF1-210ENST00000532935 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
CPSF1-210ENST00000532935 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 CPA1P15085 419 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 KCNA10Q16322 511 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 CCSAPQ6IQ19 270 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 BLOC1S2Q6QNY1 142 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 TLK2Q86UE8 772 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 MAP3K20Q9NYL2 800 aaKnown RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
CPSF1-210ENST00000532935 ZMYND8Q9ULU4 1186 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-210ENST00000532935 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 RBM47A0AV96 593 aaKnown RBP17.78■□□□□ 0.44
CPSF1-210ENST00000532935 MOXD2PA6NHM9 499 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 CTAGE5O15320 804 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 ZBTB43O43298 467 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 ACLYP53396 1101 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 RTP1P59025 263 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 NKX3-2P78367 333 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 FGD1P98174 961 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 SNX17Q15036 470 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms