RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 NLRP10Q86W26 655 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 TRIML1Q8N9V2 468 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 LRRC53A6NM62 1247 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 SFI1A8K8P3 1242 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
CHEK1-213ENST00000532449 KRIT1O00522 736 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 TNNC1P63316 161 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 PEX26Q7Z412 305 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 TRIM58Q8NG06 486 aa11.94□□□□□ -0.5
CHEK1-213ENST00000532449 N4BP2L2Q92802 583 aaPredicted RBP11.94□□□□□ -0.5
CHEK1-213ENST00000532449 OVOS2A0A0J9YW53 1432 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 OVOS2Q6IE36 1432 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 A0A087WUV0 522 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 KLRF2D3W0D1 207 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 CLIC2O15247 247 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 CARSP49589 748 aaKnown RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 PAK2Q13177 524 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 CCDC38Q502W7 563 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 HIBCHQ6NVY1 386 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 ATP8B1O43520 1251 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 LRRN2O75325 713 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 SLC1A4P43007 532 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 SESN3P58005 492 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 TMX4Q9H1E5 349 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 PCDHA13Q9Y5I0 950 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 CAPN6Q9Y6Q1 641 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 TCP10Q12799 353 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-213ENST00000532449 UBE2SQ16763 222 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 SFMBT2Q5VUG0 894 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 B4GALNT4Q76KP1 1039 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 KIFC2Q96AC6 838 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
CHEK1-213ENST00000532449 GNAT2P19087 354 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 NR1D1P20393 614 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 CDC25CP30307 473 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 IRAK1P51617 712 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 UBXN2AP68543 259 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 STK4Q13043 487 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 TRIM14Q14142 442 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 ZNF658Q5TYW1 1059 aaPredicted RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 CCDC50Q8IVM0 306 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 EFCAB13Q8IY85 973 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 HPCAL4Q9UM19 191 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 PALMO75781 387 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 ASIC2Q16515 512 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 TBC1D1Q86TI0 1168 aaPredicted RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 P2RX5Q93086 422 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 ZNF622Q969S3 477 aaKnown RBP eCLIP11.92□□□□□ -0.54e-6■□□□□ 9.9
CHEK1-213ENST00000532449 CCDC51Q96ER9 411 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 RBM12Q9NTZ6 932 aaKnown RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 TBK1Q9UHD2 729 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 SKAP2O75563 359 aaPredicted RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 PLTPP55058 493 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 CALCRLQ16602 461 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 EAPPQ56P03 285 aaPredicted RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 RSRC2Q7L4I2 434 aaKnown RBP11.92□□□□□ -0.5
CHEK1-213ENST00000532449 MAP3K14Q99558 947 aa11.92□□□□□ -0.5
CHEK1-213ENST00000532449 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 TRIP13Q15645 432 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 TXNRD1Q16881 649 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 MMS22LQ6ZRQ5 1243 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 SPATA4Q8NEY3 305 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 FAM184BQ9ULE4 1060 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 A0A1W2PRG0 241 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 HDLBPQ00341 1268 aaKnown RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 LRRC14Q15048 493 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 RABL6Q3YEC7 729 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PIGBQ92521 554 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 STIM2Q9P246 746 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PDE2AO00408 941 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 SORBS3O60504 671 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 CYP2J2P51589 502 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 PABPC4Q13310 644 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHEK1-213ENST00000532449 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
CHEK1-213ENST00000532449 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms