RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 REC8O95072 547 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 CALM1P0DP23 149 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 CALM2P0DP24 149 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 CALM3P0DP25 149 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 MRPL12P52815 198 aaKnown RBP26.68■■□□□ 1.86
CAPN1-222ENST00000532285 TNFAIP2Q03169 654 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 SLC35G1Q2M3R5 365 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 IQSEC1Q6DN90 963 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 MYL10Q9BUA6 226 aa26.68■■□□□ 1.86
CAPN1-222ENST00000532285 CYTH3O43739 400 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 ATN1P54259 1190 aaPredicted RBP26.67■■□□□ 1.86
CAPN1-222ENST00000532285 TAPT1Q6NXT6 567 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 SLC39A5Q6ZMH5 540 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 EEPD1Q7L9B9 569 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 HOMER1Q86YM7 354 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 FBXO16Q8IX29 292 aaPredicted RBP26.67■■□□□ 1.86
CAPN1-222ENST00000532285 KLHDC9Q8NEP7 349 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 TBC1D5Q92609 795 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 PIGSQ96S52 555 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 LZTS2Q9BRK4 669 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 LRRC2Q9BYS8 371 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 UPF3AQ9H1J1 476 aaKnown RBP26.67■■□□□ 1.86
CAPN1-222ENST00000532285 PCDHA1Q9Y5I3 950 aa26.67■■□□□ 1.86
CAPN1-222ENST00000532285 PNMA6FA0A0J9YX94 578 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 PPP1R11O60927 126 aaPredicted RBP26.66■■□□□ 1.86
CAPN1-222ENST00000532285 HMGB1P09429 215 aaKnown RBP26.66■■□□□ 1.86
CAPN1-222ENST00000532285 SMARCA1P28370 1054 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 GNAQP50148 359 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 GJA9P57773 515 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 NOL8Q76FK4 1167 aaKnown RBP26.66■■□□□ 1.86
CAPN1-222ENST00000532285 DHX32Q7L7V1 743 aaKnown RBP26.66■■□□□ 1.86
CAPN1-222ENST00000532285 KCNB2Q92953 911 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 FERMT2Q96AC1 680 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 SLC12A7Q9Y666 1083 aa26.66■■□□□ 1.86
CAPN1-222ENST00000532285 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 C6orf222P0C671 652 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 CST5P28325 142 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 EXOSC10Q01780 885 aaKnown RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 PDE4DQ08499 809 aa26.65■■□□□ 1.86
CAPN1-222ENST00000532285 ADCK5Q3MIX3 580 aa26.65■■□□□ 1.86
CAPN1-222ENST00000532285 SGMS1Q86VZ5 419 aa26.65■■□□□ 1.86
CAPN1-222ENST00000532285 SYTL5Q8TDW5 730 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 SPZ1Q9BXG8 430 aa26.65■■□□□ 1.86
CAPN1-222ENST00000532285 PDGFCQ9NRA1 345 aa26.65■■□□□ 1.86
CAPN1-222ENST00000532285 COLQQ9Y215 455 aaPredicted RBP26.65■■□□□ 1.86
CAPN1-222ENST00000532285 MOXD2PA6NHM9 499 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 EDNRBP24530 442 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 HSPA4P34932 840 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 RTP1P59025 263 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 KCNA10Q16322 511 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 CCSAPQ6IQ19 270 aaPredicted RBP26.64■■□□□ 1.86
CAPN1-222ENST00000532285 SAMD3Q8N6K7 520 aa26.64■■□□□ 1.86
CAPN1-222ENST00000532285 PCSK9Q8NBP7 692 aaKnown RBP26.64■■□□□ 1.86
CAPN1-222ENST00000532285 MAP3K20Q9NYL2 800 aaKnown RBP26.64■■□□□ 1.86
CAPN1-222ENST00000532285 ZMYND8Q9ULU4 1186 aaPredicted RBP26.64■■□□□ 1.86
CAPN1-222ENST00000532285 GNEQ9Y223 722 aaKnown RBP26.64■■□□□ 1.86
CAPN1-222ENST00000532285 A0A1W2PQ45 241 aaPredicted RBP26.63■■□□□ 1.85
CAPN1-222ENST00000532285 A0A1W2PQY0 241 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 CFBP00751 764 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 SMPD1P17405 629 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 ACLYP53396 1101 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 NKX3-2P78367 333 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 SNX17Q15036 470 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 C1orf53Q5VUE5 145 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 CHRDL2Q6WN34 429 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 SYNE3Q6ZMZ3 975 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 NSUN6Q8TEA1 469 aaKnown RBP26.63■■□□□ 1.85
CAPN1-222ENST00000532285 TAAR1Q96RJ0 339 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 Q9Y3F1 56 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 KIAA1217Q5T5P2 1943 aa26.63■■□□□ 1.85
CAPN1-222ENST00000532285 MYADML2A6NDP7 307 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 OPLAHO14841 1288 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 EPB41L2O43491 1005 aaKnown RBP26.62■■□□□ 1.85
CAPN1-222ENST00000532285 HSD17B4P51659 736 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 GHRHRQ02643 423 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 GNASQ5JWF2 1037 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 FANCBQ8NB91 859 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 RRP36Q96EU6 259 aaKnown RBP26.62■■□□□ 1.85
CAPN1-222ENST00000532285 AP5M1Q9H0R1 490 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 COL20A1Q9P218 1284 aa26.62■■□□□ 1.85
CAPN1-222ENST00000532285 RBM47A0AV96 593 aaKnown RBP26.61■■□□□ 1.85
CAPN1-222ENST00000532285 SYN1P17600 705 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 HABP4Q5JVS0 413 aaKnown RBP26.61■■□□□ 1.85
CAPN1-222ENST00000532285 TLK2Q86UE8 772 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 IWS1Q96ST2 819 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 RMDN3Q96TC7 470 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 WDR11Q9BZH6 1224 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 ATP11BQ9Y2G3 1177 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 SNX14Q9Y5W7 946 aa26.61■■□□□ 1.85
CAPN1-222ENST00000532285 RXRAP19793 462 aa26.6■■□□□ 1.85
CAPN1-222ENST00000532285 IRX5P78411 483 aaPredicted RBP26.6■■□□□ 1.85
CAPN1-222ENST00000532285 DUSP28Q4G0W2 176 aa26.6■■□□□ 1.85
CAPN1-222ENST00000532285 PIBF1Q8WXW3 757 aa26.6■■□□□ 1.85
CAPN1-222ENST00000532285 TCEANC2Q96MN5 208 aa26.6■■□□□ 1.85
CAPN1-222ENST00000532285 CTAGE5O15320 804 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 DYNC1LI2O43237 492 aaPredicted RBP26.59■■□□□ 1.85
CAPN1-222ENST00000532285 PLEKHA8P1O95397 391 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 ASGR1P07306 291 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 TRIM60Q495X7 471 aa26.59■■□□□ 1.85
CAPN1-222ENST00000532285 ARHGEF16Q5VV41 709 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms