RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 TAL1P17542 331 aaPredicted RBP12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 EDNRBP24530 442 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 NKX3-2P78367 333 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 PRAMEF19Q5SWL8 479 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 NFXL1Q6ZNB6 911 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 CCDC144CPQ8IYA2 1237 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 PIGSQ96S52 555 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 LRRC2Q9BYS8 371 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 VAT1LQ9HCJ6 419 aa12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
GPATCH4-216ENST00000531900 DNM1LO00429 736 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 OPLAHO14841 1288 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 DHX16O60231 1041 aaKnown RBP12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 BMP8BP34820 402 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 HSD17B4P51659 736 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 ANAPC15P60006 121 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 SRBD1Q8N5C6 995 aaKnown RBP12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 SENP6Q9GZR1 1112 aaPredicted RBP12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 BRPF3Q9ULD4 1205 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 NID2Q14112 1375 aa12.54□□□□□ -0.4
GPATCH4-216ENST00000531900 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 KBTBD13C9JR72 458 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 DUSP11O75319 330 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 ALDH5A1P51649 535 aaPredicted RBP12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 FUT2Q10981 343 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 USH1GQ495M9 461 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 SLC30A10Q6XR72 485 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 TMTC3Q6ZXV5 915 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 SYTL5Q8TDW5 730 aaPredicted RBP12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 GDF15Q99988 308 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 MYL10Q9BUA6 226 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 FAM184BQ9ULE4 1060 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 LRRC37A2A6NM11 1700 aa12.53□□□□□ -0.4
GPATCH4-216ENST00000531900 ALPK3Q96L96 1907 aa12.52□□□□□ -0.4
GPATCH4-216ENST00000531900 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 B4DLN1 442 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 ZBTB43O43298 467 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 ADAMTS4O75173 837 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 RARBP10826 455 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 SYN1P17600 705 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 LRRC26Q2I0M4 334 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 Q6ZUG5 572 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 TCEANC2Q96MN5 208 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 IWS1Q96ST2 819 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 Q9Y3F1 56 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 KIAA1217Q5T5P2 1943 aa12.52□□□□□ -0.41
GPATCH4-216ENST00000531900 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 CASTP20810 708 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 CALML3P27482 149 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 CST5P28325 142 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 GJA9P57773 515 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 LRRC41Q15345 812 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 IQSEC1Q6DN90 963 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 CCSAPQ6IQ19 270 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 HOMER1Q86YM7 354 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 KLHDC9Q8NEP7 349 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
GPATCH4-216ENST00000531900 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 ADCY6O43306 1168 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 CPA1P15085 419 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 RXRAP19793 462 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 ATN1P54259 1190 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms