RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 ITIH6Q6UXX5 1313 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 KIF11P52732 1056 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.45e-13■■■■□ 24.4
NXF1-211ENST00000531709 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 PCDHA13Q9Y5I0 950 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 EHHADHQ08426 723 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 SRP68Q9UHB9 627 aaKnown RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 FEZ2Q9UHY8 353 aaPredicted RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 HYOU1Q9Y4L1 999 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 GUCY2DQ02846 1103 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 IFFO1Q0D2I5 559 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 LCMT1Q9UIC8 334 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
NXF1-211ENST00000531709 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
NXF1-211ENST00000531709 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
NXF1-211ENST00000531709 KCNQ2O43526 872 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 FTCDO95954 541 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 WDR66Q8TBY9 1149 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 JRKLQ9Y4A0 524 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 POTEMA6NI47 508 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 KLHL30Q0D2K2 578 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 GPATCH11Q8N954 259 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 HNRNPLLQ8WVV9 542 aaKnown RBP12.56□□□□□ -0.4
NXF1-211ENST00000531709 TMEM47Q9BQJ4 181 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 PCDHA6Q9UN73 950 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 PCDHA8Q9Y5H6 950 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 MRC1P22897 1456 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 MST1RQ04912 1400 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 PPFIA1Q13136 1202 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 SRLQ86TD4 932 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
NXF1-211ENST00000531709 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
NXF1-211ENST00000531709 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 EHD2Q9NZN4 543 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 GFPT1Q06210 699 aaPredicted RBP12.56□□□□□ -0.4
NXF1-211ENST00000531709 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 COG1Q8WTW3 980 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 LRRC1Q9BTT6 524 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 TRIM31Q9BZY9 425 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
NXF1-211ENST00000531709 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 EIF3CLB5ME19 914 aaKnown RBP12.55□□□□□ -0.4
NXF1-211ENST00000531709 CEP104O60308 925 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 UFL1O94874 794 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 TCP1P17987 556 aaKnown RBP12.55□□□□□ -0.4
NXF1-211ENST00000531709 ADCY7P51828 1080 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 CDR1P51861 262 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 VPS36Q86VN1 386 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 IFT20Q8IY31 132 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 PPM1EQ8WY54 764 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
NXF1-211ENST00000531709 EPB41L5Q9HCM4 733 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 RDXP35241 583 aaKnown RBP12.55□□□□□ -0.4
NXF1-211ENST00000531709 PPP1R2P41236 205 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 ARHGAP25P42331 645 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 NTSR2O95665 410 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
NXF1-211ENST00000531709 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 KRT12Q99456 494 aa12.55□□□□□ -0.4
NXF1-211ENST00000531709 BTDP43251 543 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 IL17AQ16552 155 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
NXF1-211ENST00000531709 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 FAM184BQ9ULE4 1060 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
NXF1-211ENST00000531709 CHD2O14647 1828 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms