RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 RPS6P62753 249 aaKnown RBP15.35■□□□□ 0.05
SF3B2-212ENST00000531589 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-212ENST00000531589 BEX3Q00994 111 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 PDE4DQ08499 809 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 DUSP28Q4G0W2 176 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 IFIT1BQ5T764 474 aaKnown RBP15.35■□□□□ 0.05
SF3B2-212ENST00000531589 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
SF3B2-212ENST00000531589 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 ABCB11O95342 1321 aa15.35■□□□□ 0.05
SF3B2-212ENST00000531589 LTBP2Q14767 1821 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 ITGB8P26012 769 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 CDC37Q16543 378 aaPredicted RBP15.34■□□□□ 0.05
SF3B2-212ENST00000531589 USH1GQ495M9 461 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
SF3B2-212ENST00000531589 C9orf50Q5SZB4 431 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 CXCL17Q6UXB2 119 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 Q7L0L9 218 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 WDR11Q9BZH6 1224 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 MTMR10Q9NXD2 777 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 TBX21Q9UL17 535 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 STXBP5LQ9Y2K9 1186 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 LAMA3Q16787 3333 aa15.34■□□□□ 0.05
SF3B2-212ENST00000531589 RBM47A0AV96 593 aaKnown RBP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 ERICH2A1L162 156 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 CHMLP26374 656 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 CPT1AP50416 773 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 SMAD3P84022 425 aaKnown RBP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 ZNF697Q5TEC3 545 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 MFSD5Q6N075 450 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 FAM126BQ8IXS8 530 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 TMEM199Q8N511 208 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 RNPC3Q96LT9 517 aaKnown RBP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 POLR3EQ9NVU0 708 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 MRPL11Q9Y3B7 192 aaKnown RBP15.33■□□□□ 0.04
SF3B2-212ENST00000531589 LAMA4Q16363 1823 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 MCM3APO60318 1980 aa15.33■□□□□ 0.04
SF3B2-212ENST00000531589 EDNRBP24530 442 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 TRAF1Q13077 416 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 PPIGQ13427 754 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■□□□ 14
SF3B2-212ENST00000531589 ITGA7Q13683 1181 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 SART3Q15020 963 aaKnown RBP15.32■□□□□ 0.04
SF3B2-212ENST00000531589 PPP2R5BQ15173 497 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 RALYLQ86SE5 291 aaKnown RBP15.32■□□□□ 0.04
SF3B2-212ENST00000531589 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 SCFD2Q8WU76 684 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 IL25Q9H293 177 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
SF3B2-212ENST00000531589 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
SF3B2-212ENST00000531589 DDX49Q9Y6V7 483 aaKnown RBP15.32■□□□□ 0.04
SF3B2-212ENST00000531589 QRICH1Q2TAL8 776 aa15.31■□□□□ 0.04
SF3B2-212ENST00000531589 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
SF3B2-212ENST00000531589 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
SF3B2-212ENST00000531589 NSUN6Q8TEA1 469 aaKnown RBP15.31■□□□□ 0.04
SF3B2-212ENST00000531589 AMNQ9BXJ7 453 aa15.31■□□□□ 0.04
SF3B2-212ENST00000531589 VAT1LQ9HCJ6 419 aa15.31■□□□□ 0.04
SF3B2-212ENST00000531589 KLRF2D3W0D1 207 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 SGSM2O43147 1006 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 KPNA6O60684 536 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 CD4P01730 458 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 TTLL4Q14679 1199 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 SEC23AQ15436 765 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 OR6J1Q8NGC5 347 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 IWS1Q96ST2 819 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 JMJD4Q9H9V9 463 aa15.3■□□□□ 0.04
SF3B2-212ENST00000531589 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
SF3B2-212ENST00000531589 CYP21A2P08686 494 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 SUPT20HL2P0C7V6 817 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
SF3B2-212ENST00000531589 EPHB4P54760 987 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 STXBP2Q15833 593 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 TMEM63BQ5T3F8 832 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 PSRC1Q6PGN9 363 aaPredicted RBP15.29■□□□□ 0.04
SF3B2-212ENST00000531589 CYB5R4Q7L1T6 521 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 SAMD3Q8N6K7 520 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 RMDN3Q96TC7 470 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 PPP1R12CQ9BZL4 782 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
SF3B2-212ENST00000531589 LRRC37A2A6NM11 1700 aa15.29■□□□□ 0.04
SF3B2-212ENST00000531589 TMEM265A0A087WTH1 108 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 E7EWF7 191 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 ZBTB5O15062 677 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 MYL3P08590 195 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 CSF2RAP15509 400 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 PTH1RQ03431 593 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 WTAPQ15007 396 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
SF3B2-212ENST00000531589 SYTL5Q8TDW5 730 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-212ENST00000531589 MAP4K1Q92918 833 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms