RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
C11orf54-210ENST00000531516 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
C11orf54-210ENST00000531516 MORC4Q8TE76 937 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
C11orf54-210ENST00000531516 CLEC4DQ8WXI8 215 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 TOX2Q96NM4 488 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 ESYT1Q9BSJ8 1104 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 MTA3Q9BTC8 594 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 UPF3AQ9H1J1 476 aaKnown RBP14.62□□□□□ -0.07
C11orf54-210ENST00000531516 GPHNQ9NQX3 736 aaPredicted RBP14.62□□□□□ -0.07
C11orf54-210ENST00000531516 TMEM39AQ9NV64 488 aa14.62□□□□□ -0.07
C11orf54-210ENST00000531516 CEP290O15078 2479 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 ZBTB5O15062 677 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 RAG1P15918 1043 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 GNAQP50148 359 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 CPT1AP50416 773 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 PPP2R5BQ15173 497 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 SLC30A10Q6XR72 485 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 SYNE3Q6ZMZ3 975 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 SCFD2Q8WU76 684 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 TMEM87BQ96K49 555 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 WDR11Q9BZH6 1224 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 CPVLQ9H3G5 476 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
C11orf54-210ENST00000531516 MAP3K20Q9NYL2 800 aaKnown RBP14.61□□□□□ -0.07
C11orf54-210ENST00000531516 CDC45O75419 566 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 CALM1P0DP23 149 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 CALM2P0DP24 149 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 CALM3P0DP25 149 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 SMPD1P17405 629 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 TTLL4Q14679 1199 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 GRM4Q14833 912 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 ARHGEF16Q5VV41 709 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 ANKRD33Q7Z3H0 272 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 IWS1Q96ST2 819 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 LZTS2Q9BRK4 669 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 KATNBL1Q9H079 304 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 PCDHA1Q9Y5I3 950 aa14.6□□□□□ -0.07
C11orf54-210ENST00000531516 PALM3A6NDB9 673 aaPredicted RBP14.59□□□□□ -0.07
C11orf54-210ENST00000531516 ARVCFO00192 962 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 PRC1O43663 620 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 KPNA6O60684 536 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 DDAH1O94760 285 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 CFBP00751 764 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 NKX3-2P78367 333 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 STXBP2Q15833 593 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 LRIT3Q3SXY7 679 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
C11orf54-210ENST00000531516 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 HOMER1Q86YM7 354 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 PURBQ96QR8 312 aaKnown RBP14.59□□□□□ -0.07
C11orf54-210ENST00000531516 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
C11orf54-210ENST00000531516 MAD2L2Q9UI95 211 aa14.59□□□□□ -0.07
C11orf54-210ENST00000531516 GNEQ9Y223 722 aaKnown RBP14.59□□□□□ -0.07
C11orf54-210ENST00000531516 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.58□□□□□ -0.08
C11orf54-210ENST00000531516 SLC27A2O14975 620 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 BEX3Q00994 111 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 KRT32Q14532 448 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 CREB3L3Q68CJ9 461 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 CHST3Q7LGC8 479 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 OR6J1Q8NGC5 347 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 BADQ92934 168 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 MAP3K14Q99558 947 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 LSG1Q9H089 658 aaKnown RBP14.58□□□□□ -0.08
C11orf54-210ENST00000531516 PDGFCQ9NRA1 345 aa14.58□□□□□ -0.08
C11orf54-210ENST00000531516 LAMA4Q16363 1823 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 ZNFX1Q9P2E3 1918 aaKnown RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 MYADML2A6NDP7 307 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 KIAA0355O15063 1070 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 EDNRBP24530 442 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 MB21D2Q8IYB1 491 aaPredicted RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 ZNF654Q8IZM8 581 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 SYTL5Q8TDW5 730 aaPredicted RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 CUL5Q93034 780 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 RRP36Q96EU6 259 aaKnown RBP14.57□□□□□ -0.08
C11orf54-210ENST00000531516 SLC12A7Q9Y666 1083 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 ASTN1O14525 1302 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 PLXNA1Q9UIW2 1896 aa14.57□□□□□ -0.08
C11orf54-210ENST00000531516 RBM47A0AV96 593 aaKnown RBP14.56□□□□□ -0.08
C11orf54-210ENST00000531516 ADCY6O43306 1168 aa14.56□□□□□ -0.08
C11orf54-210ENST00000531516 EIF3JO75822 258 aaKnown RBP14.56□□□□□ -0.08
C11orf54-210ENST00000531516 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
C11orf54-210ENST00000531516 FGD1P98174 961 aa14.56□□□□□ -0.08
C11orf54-210ENST00000531516 FPGSQ05932 587 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms