RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CNNM2Q9H8M5 875 aa26.09■■□□□ 1.77
TRAPPC4-210ENST00000531290 SMAD3P84022 425 aaKnown RBP26.08■■□□□ 1.77
TRAPPC4-210ENST00000531290 SLC30A10Q6XR72 485 aa26.08■■□□□ 1.77
TRAPPC4-210ENST00000531290 PTGS1P23219 599 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 RPS6P62753 249 aaKnown RBP26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 PDE4DQ08499 809 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 USH1GQ495M9 461 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 DUSP28Q4G0W2 176 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 MFSD5Q6N075 450 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 FAM126BQ8IXS8 530 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 UBAC1Q9BSL1 405 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 WDR11Q9BZH6 1224 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 CPVLQ9H3G5 476 aa26.07■■□□□ 1.76
TRAPPC4-210ENST00000531290 B4DLN1 442 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 PDE4AP27815 886 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 MRPL12P52815 198 aaKnown RBP26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 ITGA7Q13683 1181 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 ASPRV1Q53RT3 343 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 TMEM63BQ5T3F8 832 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 TTC22Q5TAA0 569 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 ENAHQ8N8S7 591 aaPredicted RBP26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 SEZ6LQ9BYH1 1024 aa26.06■■□□□ 1.76
TRAPPC4-210ENST00000531290 PPIGQ13427 754 aaKnown RBP eCLIP26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 TMEM199Q8N511 208 aa26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 SLC43A3Q8NBI5 491 aa26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 RGS22Q8NE09 1264 aa26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 DNERQ8NFT8 737 aa26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 TNKSO95271 1327 aa26.05■■□□□ 1.76
TRAPPC4-210ENST00000531290 DHX16O60231 1041 aaKnown RBP26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 PARP1P09874 1014 aaKnown RBP26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 GSPT1P15170 499 aaKnown RBP26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 CDC37Q16543 378 aaPredicted RBP26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 ADGRF4Q8IZF3 695 aa26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 RUFY2Q8WXA3 655 aa26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 GUCD1Q96NT3 240 aa26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 PPP1R12CQ9BZL4 782 aa26.04■■□□□ 1.76
TRAPPC4-210ENST00000531290 CD4P01730 458 aa26.03■■□□□ 1.76
TRAPPC4-210ENST00000531290 IFIT1BQ5T764 474 aaKnown RBP26.03■■□□□ 1.76
TRAPPC4-210ENST00000531290 SEMA6BQ9H3T3 888 aa26.03■■□□□ 1.76
TRAPPC4-210ENST00000531290 VAT1LQ9HCJ6 419 aa26.03■■□□□ 1.76
TRAPPC4-210ENST00000531290 LTBP2Q14767 1821 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 RBM47A0AV96 593 aaKnown RBP26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 CPT1AP50416 773 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 IRX6P78412 446 aaPredicted RBP26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 TRDNQ13061 729 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 MAF1Q9H063 256 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 IL25Q9H293 177 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 POLR3EQ9NVU0 708 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 ABCB11O95342 1321 aa26.02■■□□□ 1.76
TRAPPC4-210ENST00000531290 COL6A3P12111 3177 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 GRIN2DO15399 1336 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 CSF2RAP15509 400 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 EDNRBP24530 442 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 BRDTQ58F21 947 aaPredicted RBP26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 MCF2L2Q86YR7 1114 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 OR6J1Q8NGC5 347 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 SCFD2Q8WU76 684 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 RAD50Q92878 1312 aa26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.01■■□□□ 1.753e-6■■□□□ 14
TRAPPC4-210ENST00000531290 GPHNQ9NQX3 736 aaPredicted RBP26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 LAMA2P24043 3122 aaKnown RBP26.01■■□□□ 1.75
TRAPPC4-210ENST00000531290 HSFX4A0A1B0GTS1 333 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-210ENST00000531290 HSFX3A0A1B0GWH4 333 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-210ENST00000531290 NKRFO15226 690 aaKnown RBP eCLIP26■■□□□ 1.75
TRAPPC4-210ENST00000531290 PSMC6P62333 389 aa26■■□□□ 1.75
TRAPPC4-210ENST00000531290 PPP2R5BQ15173 497 aa26■■□□□ 1.75
TRAPPC4-210ENST00000531290 HIPK3Q9H422 1215 aa26■■□□□ 1.75
TRAPPC4-210ENST00000531290 MRPL11Q9Y3B7 192 aaKnown RBP26■■□□□ 1.75
TRAPPC4-210ENST00000531290 U3KPZ7 1027 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-210ENST00000531290 MYL3P08590 195 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 CYP2C18P33260 490 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 QRICH1Q2TAL8 776 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 FBXO11Q86XK2 927 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 CDX2Q99626 313 aaPredicted RBP25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 TRPV6Q9H1D0 765 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 JMJD4Q9H9V9 463 aa25.99■■□□□ 1.75
TRAPPC4-210ENST00000531290 CHMLP26374 656 aa25.98■■□□□ 1.75
TRAPPC4-210ENST00000531290 TMEM240Q5SV17 173 aa25.98■■□□□ 1.75
TRAPPC4-210ENST00000531290 C16orf59Q7L2K0 433 aa25.98■■□□□ 1.75
TRAPPC4-210ENST00000531290 TBC1D5Q92609 795 aa25.98■■□□□ 1.75
TRAPPC4-210ENST00000531290 B4GALT4O60513 344 aa25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 ACRP10323 421 aa25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 TXNP10599 105 aaKnown RBP25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 TTLL4Q14679 1199 aa25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 PSRC1Q6PGN9 363 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 SYTL5Q8TDW5 730 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 NSUN6Q8TEA1 469 aaKnown RBP25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 MTG1Q9BT17 334 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC4-210ENST00000531290 TMEM265A0A087WTH1 108 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 KPNA6O60684 536 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 PURAQ00577 322 aaKnown RBP25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 ZNF365Q70YC5 407 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 CYB5R4Q7L1T6 521 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 TAAR1Q96RJ0 339 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 ALDH8A1Q9H2A2 487 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 TTYH1Q9H313 450 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 IL23AQ9NPF7 189 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 MCM3APO60318 1980 aa25.96■■□□□ 1.75
TRAPPC4-210ENST00000531290 ERICH2A1L162 156 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 KLRF2D3W0D1 207 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms