RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 NUP133Q8WUM0 1156 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 TBC1D5Q92609 795 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 KCNB2Q92953 911 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 NEK1Q96PY6 1258 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 LRRC2Q9BYS8 371 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 VTA1Q9NP79 307 aa22.07■■□□□ 1.12
UBXN1-211ENST00000531056 BAZ2BQ9UIF8 2168 aaKnown RBP22.06■■□□□ 1.12
UBXN1-211ENST00000531056 CCDC69A6NI79 296 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 ATN1P54259 1190 aaPredicted RBP22.06■■□□□ 1.12
UBXN1-211ENST00000531056 GJA9P57773 515 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 NKX3-2P78367 333 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 EEPD1Q7L9B9 569 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 PIGSQ96S52 555 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 TSEN34Q9BSV6 310 aaKnown RBP22.06■■□□□ 1.12
UBXN1-211ENST00000531056 PDGFCQ9NRA1 345 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 COL20A1Q9P218 1284 aa22.06■■□□□ 1.12
UBXN1-211ENST00000531056 COLQQ9Y215 455 aaPredicted RBP22.06■■□□□ 1.12
UBXN1-211ENST00000531056 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
UBXN1-211ENST00000531056 CTAGE5O15320 804 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 RTP1P59025 263 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 IRX5P78411 483 aaPredicted RBP22.05■■□□□ 1.12
UBXN1-211ENST00000531056 EXOSC10Q01780 885 aaKnown RBP22.05■■□□□ 1.12
UBXN1-211ENST00000531056 GHRHRQ02643 423 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 TNFAIP2Q03169 654 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 SLC39A5Q6ZMH5 540 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 NFXL1Q6ZNB6 911 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 HOMER1Q86YM7 354 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 MCF2L2Q86YR7 1114 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 CTCFLQ8NI51 663 aaPredicted RBP22.05■■□□□ 1.12
UBXN1-211ENST00000531056 SYTL5Q8TDW5 730 aaPredicted RBP22.05■■□□□ 1.12
UBXN1-211ENST00000531056 FERMT2Q96AC1 680 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 SPZ1Q9BXG8 430 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 PRO3102Q9H379 93 aa22.05■■□□□ 1.12
UBXN1-211ENST00000531056 ZMYND8Q9ULU4 1186 aaPredicted RBP22.05■■□□□ 1.12
UBXN1-211ENST00000531056 A0A1W2PQ45 241 aaPredicted RBP22.04■■□□□ 1.12
UBXN1-211ENST00000531056 A0A1W2PQY0 241 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 SMPD1P17405 629 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 KIF5BP33176 963 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 HSPA4P34932 840 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 KRT32Q14532 448 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 C1orf53Q5VUE5 145 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 CHRDL2Q6WN34 429 aa22.04■■□□□ 1.12
UBXN1-211ENST00000531056 PNMA6FA0A0J9YX94 578 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 RBM47A0AV96 593 aaKnown RBP22.03■■□□□ 1.12
UBXN1-211ENST00000531056 MOXD2PA6NHM9 499 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 C6orf222P0C671 652 aaPredicted RBP22.03■■□□□ 1.12
UBXN1-211ENST00000531056 SYN1P17600 705 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 HSD17B4P51659 736 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 KCNA10Q16322 511 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 IQSEC1Q6DN90 963 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 DHX32Q7L7V1 743 aaKnown RBP22.03■■□□□ 1.12
UBXN1-211ENST00000531056 TAAR1Q96RJ0 339 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 PCDHA1Q9Y5I3 950 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 LTBP2Q14767 1821 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 DNAH12Q6ZR08 3092 aa22.03■■□□□ 1.12
UBXN1-211ENST00000531056 REC8O95072 547 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 PLEKHA8P1O95397 391 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 CALM1P0DP23 149 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 CALM2P0DP24 149 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 CALM3P0DP25 149 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 RXRAP19793 462 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 PTGS1P23219 599 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 SMARCA1P28370 1054 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 ACLYP53396 1101 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 PDE4DQ08499 809 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 HABP4Q5JVS0 413 aaKnown RBP22.02■■□□□ 1.12
UBXN1-211ENST00000531056 TMEM63BQ5T3F8 832 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 TLK2Q86UE8 772 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 TCEANC2Q96MN5 208 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
UBXN1-211ENST00000531056 LZTS2Q9BRK4 669 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 SPC25Q9HBM1 224 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 SLC12A7Q9Y666 1083 aa22.02■■□□□ 1.12
UBXN1-211ENST00000531056 CFBP00751 764 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 GNAQP50148 359 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 TRAF1Q13077 416 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 TRIM60Q495X7 471 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 RAB11FIP4Q86YS3 637 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 SRBD1Q8N5C6 995 aaKnown RBP22.01■■□□□ 1.11
UBXN1-211ENST00000531056 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
UBXN1-211ENST00000531056 ATP11BQ9Y2G3 1177 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 Q9Y3F1 56 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 SNX14Q9Y5W7 946 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 KIAA1217Q5T5P2 1943 aa22.01■■□□□ 1.11
UBXN1-211ENST00000531056 EPB41L2O43491 1005 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 HMGB1P09429 215 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 DUSP28Q4G0W2 176 aa22■■□□□ 1.11
UBXN1-211ENST00000531056 APOA5Q6Q788 366 aa22■■□□□ 1.11
UBXN1-211ENST00000531056 NOL8Q76FK4 1167 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 SAMD3Q8N6K7 520 aa22■■□□□ 1.11
UBXN1-211ENST00000531056 PCSK9Q8NBP7 692 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 NSUN6Q8TEA1 469 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 GDF15Q99988 308 aa22■■□□□ 1.11
UBXN1-211ENST00000531056 MAP3K20Q9NYL2 800 aaKnown RBP22■■□□□ 1.11
UBXN1-211ENST00000531056 B4DLN1 442 aa21.99■■□□□ 1.11
UBXN1-211ENST00000531056 ASGR1P07306 291 aa21.99■■□□□ 1.11
UBXN1-211ENST00000531056 MRPL12P52815 198 aaKnown RBP21.99■■□□□ 1.11
UBXN1-211ENST00000531056 BEX3Q00994 111 aa21.99■■□□□ 1.11
UBXN1-211ENST00000531056 GNASQ5JWF2 1037 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms