RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KIF3AQ9Y496 699 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 CFBP00751 764 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 HOXD10P28358 340 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 GJB2P29033 226 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 ADORA2AP29274 412 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 HSD17B4P51659 736 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 RPS6P62753 249 aaKnown RBP19.47■□□□□ 0.71
SF3B2-211ENST00000531041 RNF207Q6ZRF8 634 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 TBC1D5Q92609 795 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 USP6NLQ92738 828 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 NUDT12Q9BQG2 462 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 GLT8D2Q9H1C3 349 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 PSTPIP2Q9H939 334 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 RIC8AQ9NPQ8 531 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 MYH7BA7E2Y1 1941 aa19.47■□□□□ 0.71
SF3B2-211ENST00000531041 PIK3CDO00329 1044 aa19.46■□□□□ 0.71
SF3B2-211ENST00000531041 MRPL12P52815 198 aaKnown RBP19.46■□□□□ 0.71
SF3B2-211ENST00000531041 BAATQ14032 418 aaPredicted RBP19.46■□□□□ 0.71
SF3B2-211ENST00000531041 CUL5Q93034 780 aa19.46■□□□□ 0.71
SF3B2-211ENST00000531041 C6orf50Q9HD87 102 aa19.46■□□□□ 0.71
SF3B2-211ENST00000531041 GCOM1H8Y6P7 765 aaPredicted RBP19.45■□□□□ 0.7
SF3B2-211ENST00000531041 MEIS2O14770 477 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 POLR2MP0CAP2 368 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 GNA11P29992 359 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 ADCY7P51828 1080 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 MAP2K5Q13163 448 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 GALNT17Q6IS24 598 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 SRRDQ9UH36 339 aa19.45■□□□□ 0.7
SF3B2-211ENST00000531041 COBLO75128 1261 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 HSP90AA1P07900 732 aaKnown RBP19.44■□□□□ 0.7
SF3B2-211ENST00000531041 HOXC6P09630 235 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 CALML3P27482 149 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 ANP32AP39687 249 aaKnown RBP19.44■□□□□ 0.7
SF3B2-211ENST00000531041 PRMT2P55345 433 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 NLRP5P59047 1200 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 OTOP1Q7RTM1 612 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 FAM133AQ8N9E0 248 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 GABRQQ9UN88 632 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
SF3B2-211ENST00000531041 KIAA1217Q5T5P2 1943 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 LRRC37A2A6NM11 1700 aa19.44■□□□□ 0.7
SF3B2-211ENST00000531041 POTEB2H3BUK9 544 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 PGK2P07205 417 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 RGS2P41220 211 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 FLT3LGP49771 235 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 PRKCZQ05513 592 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 TRIM29Q14134 588 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 NPY5RQ15761 445 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 ZNF792Q3KQV3 632 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 USP17L6PQ6QN14 398 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 BICD2Q8TD16 824 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 SYTL5Q8TDW5 730 aaPredicted RBP19.43■□□□□ 0.7
SF3B2-211ENST00000531041 C8orf76Q96K31 380 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 SLC5A4Q9NY91 659 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 KCNJ14Q9UNX9 436 aa19.43■□□□□ 0.7
SF3B2-211ENST00000531041 RBM19Q9Y4C8 960 aaKnown RBP19.43■□□□□ 0.7
SF3B2-211ENST00000531041 XRCC5P13010 732 aaKnown RBP19.42■□□□□ 0.7
SF3B2-211ENST00000531041 HOXA13P31271 388 aaPredicted RBP19.42■□□□□ 0.7
SF3B2-211ENST00000531041 CLK2P49760 499 aaKnown RBP19.42■□□□□ 0.7
SF3B2-211ENST00000531041 CNTN2Q02246 1040 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 IRF5Q13568 498 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 DAGLBQ8NCG7 672 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 FBXO18Q8NFZ0 1043 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 PRDM10Q9NQV6 1147 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 COL20A1Q9P218 1284 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 PCDHA4Q9UN74 947 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 TRIM17Q9Y577 477 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 UBE2SQ16763 222 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 KRT40Q6A162 431 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 MCTP2Q6DN12 878 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 ZNF467Q7Z7K2 595 aaPredicted RBP19.42■□□□□ 0.7
SF3B2-211ENST00000531041 BLIDQ8IZY5 108 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 DNERQ8NFT8 737 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 APBA2Q99767 749 aa19.42■□□□□ 0.7
SF3B2-211ENST00000531041 ADD3Q9UEY8 706 aaKnown RBP19.42■□□□□ 0.7
SF3B2-211ENST00000531041 LOC102724159A0A0B4J2E5 919 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 SOWAHBA6NEL2 793 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 MMP1P03956 469 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 CYP2B6P20813 491 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 PWP2Q15269 919 aaKnown RBP19.41■□□□□ 0.7
SF3B2-211ENST00000531041 REXO1Q8N1G1 1221 aaKnown RBP19.41■□□□□ 0.7
SF3B2-211ENST00000531041 FGD4Q96M96 766 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 PURBQ96QR8 312 aaKnown RBP19.41■□□□□ 0.7
SF3B2-211ENST00000531041 TAAR1Q96RJ0 339 aa19.41■□□□□ 0.7
SF3B2-211ENST00000531041 M0R2N6 131 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 ADAMTS3O15072 1205 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 FOSP01100 380 aaPredicted RBP19.4■□□□□ 0.7
SF3B2-211ENST00000531041 PDCP20941 246 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 FOSBP53539 338 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 AP3B2Q13367 1082 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
SF3B2-211ENST00000531041 FCHSD1Q86WN1 690 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 MAML3Q96JK9 1138 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms