RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 hCG_1984214I3L0E3 225 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 HMGCRP04035 888 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 UBXN2AP68543 259 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 SCRN1Q12765 414 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 BAATQ14032 418 aaPredicted RBP17.65■□□□□ 0.42
CCS-206ENST00000530961 ME3Q16798 604 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 MFSD14CQ5VZR4 134 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 ZNF713Q8N859 430 aaPredicted RBP17.65■□□□□ 0.42
CCS-206ENST00000530961 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 MAML3Q96JK9 1138 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
CCS-206ENST00000530961 RNF26Q9BY78 433 aaPredicted RBP17.65■□□□□ 0.42
CCS-206ENST00000530961 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 BIN2Q9UBW5 565 aaPredicted RBP17.65■□□□□ 0.42
CCS-206ENST00000530961 UNC80Q8N2C7 3258 aa17.65■□□□□ 0.42
CCS-206ENST00000530961 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 ELNP15502 786 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 MCM2P49736 904 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 RPS6P62753 249 aaKnown RBP17.64■□□□□ 0.41
CCS-206ENST00000530961 GHRHRQ02643 423 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 NOL8Q76FK4 1167 aaKnown RBP17.64■□□□□ 0.41
CCS-206ENST00000530961 TEX2Q8IWB9 1127 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 TRIB2Q92519 343 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 SH2B1Q9NRF2 756 aaPredicted RBP17.64■□□□□ 0.41
CCS-206ENST00000530961 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
CCS-206ENST00000530961 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
CCS-206ENST00000530961 RLFQ13129 1914 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 LOC102724159A0A0B4J2E5 919 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 hCG_1642624A0A1W2PR95 340 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 IGHA2P01877 340 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 CALML3P27482 149 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 SSRP1Q08945 709 aaKnown RBP17.63■□□□□ 0.41
CCS-206ENST00000530961 PWP2Q15269 919 aaKnown RBP17.63■□□□□ 0.41
CCS-206ENST00000530961 CCL14Q16627 93 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 PFKFB3Q16875 520 aaPredicted RBP17.63■□□□□ 0.41
CCS-206ENST00000530961 MAMDC4Q6UXC1 1216 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 HEATR3Q7Z4Q2 680 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCS-206ENST00000530961 SH3TC2Q8TF17 1288 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 PHKBQ93100 1093 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 GTF3C6Q969F1 213 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 LRCH3Q96II8 777 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 SLC26A6Q9BXS9 759 aa17.63■□□□□ 0.41
CCS-206ENST00000530961 GCOM1H8Y6P7 765 aaPredicted RBP17.62■□□□□ 0.41
CCS-206ENST00000530961 SOX1O00570 391 aaPredicted RBP17.62■□□□□ 0.41
CCS-206ENST00000530961 INHAP05111 366 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 POLR2MP0CAP2 368 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 SCG2P13521 617 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 HSD17B4P51659 736 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 PPP1R18Q6NYC8 613 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 DNERQ8NFT8 737 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 SYTL5Q8TDW5 730 aaPredicted RBP17.62■□□□□ 0.41
CCS-206ENST00000530961 TINF2Q9BSI4 451 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 NRBP1Q9UHY1 535 aa17.62■□□□□ 0.41
CCS-206ENST00000530961 ASB14A6NK59 587 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 B4DLN1 442 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 OPLAHO14841 1288 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 DEXIO95424 95 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 CFBP00751 764 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 MRPL12P52815 198 aaKnown RBP17.61■□□□□ 0.41
CCS-206ENST00000530961 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 MAP3K21Q5TCX8 1036 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 WWC2Q6AWC2 1192 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 GPR153Q6NV75 609 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 CCDC12Q8WUD4 166 aaPredicted RBP17.61■□□□□ 0.41
CCS-206ENST00000530961 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 CUL5Q93034 780 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
CCS-206ENST00000530961 GLT8D2Q9H1C3 349 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 PSTPIP2Q9H939 334 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
CCS-206ENST00000530961 SOWAHBA6NEL2 793 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 PIK3CDO00329 1044 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 LARGE1O95461 756 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 NAPAP54920 295 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 PKN1Q16512 942 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 DEFB123Q8N688 67 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 FGD4Q96M96 766 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 NR2E3Q9Y5X4 410 aa17.6■□□□□ 0.41
CCS-206ENST00000530961 RPTORQ8N122 1335 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 STXBP3O00186 592 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 COL9A1P20849 921 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 CYP2C19P33261 490 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 CACNB2Q08289 660 aaPredicted RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 GPKOWQ92917 476 aaPredicted RBP eCLIP17.59■□□□□ 0.416e-7■■□□□ 13.9
CCS-206ENST00000530961 LLPHQ9BRT6 129 aaKnown RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 HMX1Q9NP08 348 aaPredicted RBP17.59■□□□□ 0.41
CCS-206ENST00000530961 SH3GLB2Q9NR46 395 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
CCS-206ENST00000530961 STK36Q9NRP7 1315 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms