RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SV2BQ7L1I2 683 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 RSRC2Q7L4I2 434 aaKnown RBP19.27■□□□□ 0.68
BRCA2-204ENST00000530893 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 CERS5Q8N5B7 392 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 IQCDQ96DY2 449 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 EHD4Q9H223 541 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 USP40Q9NVE5 1235 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 LRWD1Q9UFC0 647 aa19.27■□□□□ 0.68
BRCA2-204ENST00000530893 LUC7L2Q9Y383 392 aaKnown RBP19.27■□□□□ 0.68
BRCA2-204ENST00000530893 FRMPD2Q68DX3 1309 aaPredicted RBP19.27■□□□□ 0.68
BRCA2-204ENST00000530893 LRRC47Q8N1G4 583 aaKnown RBP19.27■□□□□ 0.67
BRCA2-204ENST00000530893 RABGGTAQ92696 567 aa19.27■□□□□ 0.67
BRCA2-204ENST00000530893 CCDC17Q96LX7 622 aa19.27■□□□□ 0.67
BRCA2-204ENST00000530893 DUSP9Q99956 384 aaKnown RBP19.27■□□□□ 0.67
BRCA2-204ENST00000530893 DDX4Q9NQI0 724 aaKnown RBP19.27■□□□□ 0.67
BRCA2-204ENST00000530893 ZNF446Q9NWS9 450 aa19.27■□□□□ 0.67
BRCA2-204ENST00000530893 ATP8B1O43520 1251 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TXKP42681 527 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 GABPB1Q06547 395 aaPredicted RBP19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TMCO3Q6UWJ1 677 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 GOLGA1Q92805 767 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TEKT1Q969V4 418 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 NAP1L4Q99733 375 aaKnown RBP19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TUBGCP2Q9BSJ2 902 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TMEM260Q9NX78 707 aa19.26■□□□□ 0.67
BRCA2-204ENST00000530893 TTC26A0AVF1 554 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 RNF225M0QZC1 329 aaPredicted RBP19.25■□□□□ 0.67
BRCA2-204ENST00000530893 SHMT1P34896 483 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CEP112Q8N8E3 955 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 COA7Q96BR5 231 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CDK5RAP3Q96JB5 506 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 JMJD4Q9H9V9 463 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CDC23Q9UJX2 597 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CTAGE9A4FU28 777 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CLK2P49760 499 aaKnown RBP19.25■□□□□ 0.67
BRCA2-204ENST00000530893 MRPL12P52815 198 aaKnown RBP19.25■□□□□ 0.67
BRCA2-204ENST00000530893 DMTNQ08495 405 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 STK4Q13043 487 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 ZNF569Q5MCW4 686 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 KRT27Q7Z3Y8 459 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 ADGRF4Q8IZF3 695 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 CUL5Q93034 780 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 MRIQ9BWK5 157 aa19.25■□□□□ 0.67
BRCA2-204ENST00000530893 IRX2Q9BZI1 471 aaPredicted RBP19.25■□□□□ 0.67
BRCA2-204ENST00000530893 EPN1Q9Y6I3 576 aaPredicted RBP19.25■□□□□ 0.67
BRCA2-204ENST00000530893 NDUFA10O95299 355 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 GCFC2P16383 781 aaKnown RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 HSPA1LP34931 641 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 PDE6BP35913 854 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 GRB10Q13322 594 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 FIGNQ5HY92 759 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 FOXR2Q6PJQ5 311 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 UNC13DQ70J99 1090 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ACRBPQ8NEB7 543 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 LARP4BQ92615 738 aaKnown RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ZMYND15Q9H091 742 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ABCB11O95342 1321 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 F8W031 263 aaPredicted RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ZBTB5O15062 677 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ZRANB2O95218 330 aaKnown RBP eCLIP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 KRT79Q5XKE5 535 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 CENPPQ6IPU0 288 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 ZNF662Q6ZS27 426 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 SRGAP1Q7Z6B7 1085 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 QTRT2Q9H974 415 aaKnown RBP19.24■□□□□ 0.67
BRCA2-204ENST00000530893 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 BLOC1S4Q9NUP1 217 aa19.24■□□□□ 0.67
BRCA2-204ENST00000530893 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
BRCA2-204ENST00000530893 PES1O00541 588 aaKnown RBP19.23■□□□□ 0.67
BRCA2-204ENST00000530893 TRIM37O94972 964 aa19.23■□□□□ 0.67
BRCA2-204ENST00000530893 MEA1Q16626 185 aa19.23■□□□□ 0.67
BRCA2-204ENST00000530893 CNOT6LQ96LI5 555 aaKnown RBP19.23■□□□□ 0.67
BRCA2-204ENST00000530893 TTYH3Q9C0H2 523 aa19.23■□□□□ 0.67
BRCA2-204ENST00000530893 SLC37A4O43826 429 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 FGFR1OPO95684 399 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 ARHGAP25P42331 645 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 PSMD2Q13200 908 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 SEPT2Q15019 361 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 APOBEC3HQ6NTF7 200 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 PODNQ7Z5L7 613 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 KIAA0895Q8NCT3 520 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 PNMA5Q96PV4 448 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 ERGIC2Q96RQ1 377 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 HAUS4Q9H6D7 363 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 FHOD1Q9Y613 1164 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 A0A1W2PQJ5 194 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 B4DLN1 442 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 G3V3G9 751 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 SLC26A4O43511 780 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 EDIL3O43854 480 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 TDP2O95551 362 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms