RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 METP08581 1390 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ADD2P35612 726 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PTGDRQ13258 359 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 TRIM56Q9BRZ2 755 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 RNF40O75150 1001 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 SEPT6Q14141 434 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 AOC3Q16853 763 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ACCSQ96QU6 501 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.92
CTNND1-227ENST00000530748 ITKQ08881 620 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 LRCH2Q5VUJ6 765 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 SESTD1Q86VW0 696 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 MRFAP1L1Q96HT8 127 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 RILPQ96NA2 401 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 AMNQ9BXJ7 453 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 PUS3Q9BZE2 481 aaKnown RBP9.27□□□□□ -0.92
CTNND1-227ENST00000530748 HESX1Q9UBX0 185 aa9.27□□□□□ -0.92
CTNND1-227ENST00000530748 DDX41Q9UJV9 622 aaKnown RBP9.27□□□□□ -0.92
CTNND1-227ENST00000530748 KDM6BO15054 1643 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 PFDN6O15212 129 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 POLR2BP30876 1174 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 RASSF2P50749 326 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 ARHGEF6Q15052 776 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 DTNBO60941 627 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 PSMC2P35998 433 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 NAA25Q14CX7 972 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 FAM26FQ5R3K3 315 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 NUF2Q9BZD4 464 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 EFCAB8A8MWE9 144 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 EXOC3L4Q17RC7 722 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 CABS1Q96KC9 395 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 TRPC5Q9UL62 973 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 PCDHB4Q9Y5E5 795 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 PCDHA1Q9Y5I3 950 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 LRRIQ4A6NIV6 560 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 A6NJR5 290 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 BTBD18B2RXH4 712 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-227ENST00000530748 RFX6Q8HWS3 928 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 HAUS4Q9H6D7 363 aa9.27□□□□□ -0.93
CTNND1-227ENST00000530748 PASKQ96RG2 1323 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 TCP1P17987 556 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 BPIFB4P59827 614 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 EP400NLQ6ZTU2 488 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 CEP120Q8N960 986 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 FANCLQ9NW38 375 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SH2B2O14492 632 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 IGBP1P78318 339 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SATB1Q01826 763 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 PROSER3Q2NL68 480 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 THAP12O43422 761 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 XPOTO43592 962 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 DYNLL1P63167 89 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 BFSP1Q12934 665 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 CTAGE3PQ8IX95 158 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 ATP6V0A1Q93050 837 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SCYL1Q96KG9 808 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 GCFC2P16383 781 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 SYDE2Q5VT97 1194 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
CTNND1-227ENST00000530748 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
CTNND1-227ENST00000530748 JPH2Q9BR39 696 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms