RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 IRX5P78411 483 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 EXOSC10Q01780 885 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 KLRC3Q07444 240 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 SSRP1Q08945 709 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 COG2Q14746 738 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 LRRC41Q15345 812 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ZNF792Q3KQV3 632 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 PRAMEF19Q5SWL8 479 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 C1orf53Q5VUE5 145 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ANO1Q5XXA6 986 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 FAM109BQ6ICB4 259 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 APOA5Q6Q788 366 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 STOX1Q6ZVD7 989 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 CYB5R4Q7L1T6 521 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 CHST3Q7LGC8 479 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 SH3RF1Q7Z6J0 888 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TEX2Q8IWB9 1127 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ABRAQ8N0Z2 381 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 FAM177A1Q8N128 213 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 LRRC47Q8N1G4 583 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ZNF713Q8N859 430 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 CCDC148Q8NFR7 591 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 IGDCC4Q8TDY8 1250 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 SNX21Q969T3 373 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TRIM43Q96BQ3 446 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 MPHOSPH6Q99547 160 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TMEM47Q9BQJ4 181 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 LLPHQ9BRT6 129 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 AGXT2Q9BYV1 514 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 UBE2OQ9C0C9 1292 aaKnown RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 KATNBL1Q9H079 304 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TTYH1Q9H313 450 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 MYH6P13533 1939 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 DNAJC25-GNG10A0A024R161 153 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 B4DLN1 442 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 DLL1O00548 723 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 CTAGE5O15320 804 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 MSCO60682 206 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 PLA2G6O60733 806 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 NDUFB10O96000 172 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 ZNF865P0CJ78 1059 aaPredicted RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 PDHBP11177 359 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 NOVP48745 357 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 MRPL12P52815 198 aaKnown RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 ATN1P54259 1190 aaPredicted RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 ZNF543Q08ER8 600 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 APOBRQ0VD83 1088 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 GNL2Q13823 731 aaKnown RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 GRM4Q14833 912 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SEC23AQ15436 765 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SHHQ15465 462 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 MFSD14CQ5VZR4 134 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 MCTP2Q6DN12 878 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SLC39A5Q6ZMH5 540 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 NOL8Q76FK4 1167 aaKnown RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 RIOX2Q8IUF8 465 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SPICE1Q8N0Z3 855 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 PRPF38AQ8NAV1 312 aaKnown RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 FANCBQ8NB91 859 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SLC17A8Q8NDX2 589 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 BICD2Q8TD16 824 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 CUL5Q93034 780 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 LENG1Q96BZ8 264 aaPredicted RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SLF1Q9BQI6 1058 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 LRRC2Q9BYS8 371 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SENP6Q9GZR1 1112 aaPredicted RBP5.52□□□□□ -1.53
SSBP3-213ENST00000530618 EHMT1Q9H9B1 1298 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 PHF24Q9UPV7 400 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 SMC3Q9UQE7 1217 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 TACC3Q9Y6A5 838 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 KIAA1217Q5T5P2 1943 aa5.52□□□□□ -1.53
SSBP3-213ENST00000530618 ASTN1O14525 1302 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 TRIP12Q14669 1992 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 MYADML2A6NDP7 307 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 TMEM232C9JQI7 657 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 KLRF2D3W0D1 207 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 H3BQV1 296 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 VWA5AO00534 786 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 STRNO43815 780 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 NMT2O60551 498 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 PFKFB2O60825 505 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 DEXIO95424 95 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 SLC25A27O95847 323 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 PGK2P07205 417 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 CALML3P27482 149 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 GNA11P29992 359 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 PDIA3P30101 505 aaKnown RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 ADCYAP1R1P41586 468 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 OAZ1P54368 228 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 EVCP57679 992 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 ANTXR2P58335 489 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 STK3Q13188 491 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 TKFCQ3LXA3 575 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 FAM83BQ5T0W9 1011 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms