RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
CTNND1-224ENST00000530068 SCLYQ96I15 445 aa13.15□□□□□ -0.3
CTNND1-224ENST00000530068 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.3
CTNND1-224ENST00000530068 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
CTNND1-224ENST00000530068 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
CTNND1-224ENST00000530068 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
CTNND1-224ENST00000530068 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
CTNND1-224ENST00000530068 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 B4DLN1 442 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
CTNND1-224ENST00000530068 ICAM1P05362 532 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
CTNND1-224ENST00000530068 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
CTNND1-224ENST00000530068 PPARAQ07869 468 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 BFSP2Q13515 415 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 HCN4Q9Y3Q4 1203 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
CTNND1-224ENST00000530068 CHD7Q9P2D1 2997 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
CTNND1-224ENST00000530068 CA3P07451 260 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 MYL3P08590 195 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 CYP2C9P11712 490 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 MYOGP15173 224 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 PURAQ00577 322 aaKnown RBP13.13□□□□□ -0.31
CTNND1-224ENST00000530068 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 FTOQ9C0B1 505 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTNND1-224ENST00000530068 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
CTNND1-224ENST00000530068 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
CTNND1-224ENST00000530068 M0R2C6 588 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-224ENST00000530068 TFF2Q03403 129 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-224ENST00000530068 CCDC96Q2M329 555 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 HLA-CQ95604 372 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
CTNND1-224ENST00000530068 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
CTNND1-224ENST00000530068 KCNJ6P48051 423 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 PDE4DQ08499 809 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 NECAB3Q96P71 396 aaPredicted RBP13.11□□□□□ -0.31
CTNND1-224ENST00000530068 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
CTNND1-224ENST00000530068 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 LMCD1Q9NZU5 365 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTNND1-224ENST00000530068 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
CTNND1-224ENST00000530068 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
CTNND1-224ENST00000530068 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 A6NJR5 290 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 KCNQ1P51787 676 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 SNAP25P60880 206 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 TAP1Q03518 808 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 TMEM31Q5JXX7 168 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 MAF1Q9H063 256 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 MCM3APO60318 1980 aa13.1□□□□□ -0.31
CTNND1-224ENST00000530068 RFXAPO00287 272 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 TLL1O43897 1013 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 ORC4O43929 436 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
CTNND1-224ENST00000530068 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
CTNND1-224ENST00000530068 PTGS1P23219 599 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
CTNND1-224ENST00000530068 NOVP48745 357 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 AFAP1L1Q8TED9 768 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 CERS4Q9HA82 394 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
CTNND1-224ENST00000530068 DDX49Q9Y6V7 483 aaKnown RBP13.09□□□□□ -0.31
CTNND1-224ENST00000530068 MYH7P12883 1935 aa13.08□□□□□ -0.32
CTNND1-224ENST00000530068 NFIBO00712 420 aa13.08□□□□□ -0.32
CTNND1-224ENST00000530068 EFCAB14O75071 495 aa13.08□□□□□ -0.32
CTNND1-224ENST00000530068 CALML3P27482 149 aa13.08□□□□□ -0.32
CTNND1-224ENST00000530068 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
CTNND1-224ENST00000530068 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms