RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 VTA1Q9NP79 307 aa9.16□□□□□ -0.94
CCDC90B-212ENST00000529312 ZNF236Q9UL36 1845 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 FRMPD2Q68DX3 1309 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 WDR19Q8NEZ3 1342 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 A0A0U1RQG5 324 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 A0A1W2PQ45 241 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 A0A1W2PQY0 241 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 ERICH2A1L162 156 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 PTPDC1A2A3K4 754 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 ARVCFO00192 962 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 KIAA0355O15063 1070 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 KPNA6O60684 536 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 ASGR1P07306 291 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 PARP1P09874 1014 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 SNAP25P60880 206 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 SART3Q15020 963 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 ASPRV1Q53RT3 343 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 FAM109BQ6ICB4 259 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 CCSAPQ6IQ19 270 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 SAMD3Q8N6K7 520 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 MORC4Q8TE76 937 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 BADQ92934 168 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 MRPL11Q9Y3B7 192 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 CENPFP49454 3210 aa9.15□□□□□ -0.94
CCDC90B-212ENST00000529312 MYH4Q9Y623 1939 aa9.15□□□□□ -0.95
CCDC90B-212ENST00000529312 RAD50Q92878 1312 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 SYNRGQ9UMZ2 1314 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 GREB1LQ9C091 1923 aaPredicted RBP9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 B4E1Z4 1266 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 DHX16O60231 1041 aaKnown RBP9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 PQBP1O60828 265 aaKnown RBP9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 CDK7P50613 346 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 PDE4DQ08499 809 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 MUM1L1Q5H9M0 696 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 IFIT1BQ5T764 474 aaKnown RBP9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 TBC1D10CQ8IV04 446 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 TMTC2Q8N394 836 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 DEFB123Q8N688 67 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 ZKSCAN3Q9BRR0 538 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
CCDC90B-212ENST00000529312 ABCB11O95342 1321 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 RBM47A0AV96 593 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TRIM43BA6NCK2 446 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TIMP1P01033 207 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 CHMLP26374 656 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 CALML3P27482 149 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 ALDH5A1P51649 535 aaPredicted RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 RPS6P62753 249 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 FPGSQ05932 587 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 FAAP100Q0VG06 881 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 FSCN1Q16658 493 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 DUSP28Q4G0W2 176 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TAPT1Q6NXT6 567 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TLK2Q86UE8 772 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 FBXO11Q86XK2 927 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TMEM199Q8N511 208 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 NCOA7Q8NI08 942 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 NSUN6Q8TEA1 469 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 TRIM43Q96BQ3 446 aaPredicted RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 LRCH3Q96II8 777 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 FGD4Q96M96 766 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 IWS1Q96ST2 819 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 UBA5Q9GZZ9 404 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 KATNBL1Q9H079 304 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 GNEQ9Y223 722 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 A0A0G2JMZ2 1700 aa9.13□□□□□ -0.95
CCDC90B-212ENST00000529312 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 SOX1O00570 391 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 IFIT3O14879 490 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 GOLGA8HP0CJ92 632 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 SMPD1P17405 629 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 CPT1AP50416 773 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 ITGA7Q13683 1181 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 TTLL4Q14679 1199 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 SHHQ15465 462 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 MFSD5Q6N075 450 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 SH3RF1Q7Z6J0 888 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 RALYLQ86SE5 291 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 RPUSD2Q8IZ73 545 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 ADGRF4Q8IZF3 695 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 ENAHQ8N8S7 591 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 SCFD2Q8WU76 684 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 CLEC4DQ8WXI8 215 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 MTA3Q9BTC8 594 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 AMNQ9BXJ7 453 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 PDGFCQ9NRA1 345 aa9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-212ENST00000529312 TNKSO95271 1327 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms