RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 JMJD4Q9H9V9 463 aa14.07□□□□□ -0.16
COPB1-206ENST00000529210 STARD7Q9NQZ5 370 aa14.07□□□□□ -0.16
COPB1-206ENST00000529210 PRKAG2Q9UGJ0 569 aa14.07□□□□□ -0.16
COPB1-206ENST00000529210 RBM8AQ9Y5S9 174 aaKnown RBP14.07□□□□□ -0.16
COPB1-206ENST00000529210 TAF6LQ9Y6J9 622 aa14.07□□□□□ -0.16
COPB1-206ENST00000529210 PTPDC1A2A3K4 754 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 CABYRO75952 493 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 ASGR1P07306 291 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 SMPD1P17405 629 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 CDK7P50613 346 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 TLE2Q04725 743 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 GRM4Q14833 912 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 SART3Q15020 963 aaKnown RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 DUSP28Q4G0W2 176 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 STAG2Q8N3U4 1231 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 SAMD3Q8N6K7 520 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 PURBQ96QR8 312 aaKnown RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 MPHOSPH6Q99547 160 aaKnown RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 UBE2OQ9C0C9 1292 aaKnown RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
COPB1-206ENST00000529210 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
COPB1-206ENST00000529210 ERICH2A1L162 156 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 TRIM43BA6NCK2 446 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 B4DLN1 442 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 KLRF2D3W0D1 207 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 KIAA0355O15063 1070 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 CLTBP09497 229 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 MRPL12P52815 198 aaKnown RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 ANTXR2P58335 489 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 WTAPQ15007 396 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 NECTIN1Q15223 517 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 GNASQ5JWF2 1037 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 KIAA1211Q6ZU35 1233 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 TLK2Q86UE8 772 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 FBXO11Q86XK2 927 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 FBXO16Q8IX29 292 aaPredicted RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 TRIM43Q96BQ3 446 aaPredicted RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 PDGFCQ9NRA1 345 aa14.05□□□□□ -0.16
COPB1-206ENST00000529210 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
COPB1-206ENST00000529210 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
COPB1-206ENST00000529210 ZBTB5O15062 677 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 NKRFO15226 690 aaKnown RBP eCLIP14.04□□□□□ -0.16
COPB1-206ENST00000529210 CALML3P27482 149 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
COPB1-206ENST00000529210 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
COPB1-206ENST00000529210 FAAP100Q0VG06 881 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 TRAF1Q13077 416 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 USH1GQ495M9 461 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
COPB1-206ENST00000529210 DCDC2CA8MYV0 355 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 ARVCFO00192 962 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 SOX1O00570 391 aaPredicted RBP14.03□□□□□ -0.16
COPB1-206ENST00000529210 OPLAHO14841 1288 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 ZEB2O60315 1214 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 SMARCA1P28370 1054 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 HSD17B4P51659 736 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 FSCN1Q16658 493 aaKnown RBP14.03□□□□□ -0.16
COPB1-206ENST00000529210 SLC35G1Q2M3R5 365 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 SH3RF1Q7Z6J0 888 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 SYTL5Q8TDW5 730 aaPredicted RBP14.03□□□□□ -0.16
COPB1-206ENST00000529210 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 IWS1Q96ST2 819 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 AP5M1Q9H0R1 490 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 LY9Q9HBG7 655 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 SENP2Q9HC62 589 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 TBX21Q9UL17 535 aa14.03□□□□□ -0.16
COPB1-206ENST00000529210 DDX49Q9Y6V7 483 aaKnown RBP14.03□□□□□ -0.16
COPB1-206ENST00000529210 KIAA1217Q5T5P2 1943 aa14.02□□□□□ -0.16
COPB1-206ENST00000529210 SLC27A2O14975 620 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 DYNC1LI2O43237 492 aaPredicted RBP14.02□□□□□ -0.17
COPB1-206ENST00000529210 CYTH3O43739 400 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 PPP1R11O60927 126 aaPredicted RBP14.02□□□□□ -0.17
COPB1-206ENST00000529210 LIFRP42702 1097 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 PDE4DQ08499 809 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 TSGA10IPQ3SY00 556 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 TMEM67Q5HYA8 995 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 EEPD1Q7L9B9 569 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 NSUN6Q8TEA1 469 aaKnown RBP14.02□□□□□ -0.17
COPB1-206ENST00000529210 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 TBC1D5Q92609 795 aa14.02□□□□□ -0.17
COPB1-206ENST00000529210 LAMA2P24043 3122 aaKnown RBP14.02□□□□□ -0.17
COPB1-206ENST00000529210 PQBP1O60828 265 aaKnown RBP14.01□□□□□ -0.17
COPB1-206ENST00000529210 DDAH1O94760 285 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 CD4P01730 458 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 ITGB8P26012 769 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 MCM5P33992 734 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 BEX3Q00994 111 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 TMEM63BQ5T3F8 832 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms