RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CDHR1Q96JP9 859 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 AGBL1Q96MI9 1066 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 FOXP1Q9H334 677 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-211ENST00000528787 BTBD7Q9P203 1132 aa9.08□□□□□ -0.96
SSBP3-211ENST00000528787 CIZ1Q9ULV3 898 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-211ENST00000528787 ZNF536O15090 1300 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 MAFGO15525 162 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 LARGE1O95461 756 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 TBC1D8O95759 1140 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 BMP15O95972 392 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 CFBP00751 764 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 MMP1P03956 469 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PTPREP23469 700 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PSMC4P43686 418 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 TRAPPC10P48553 1259 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 HSD17B4P51659 736 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 HTRA3P83110 453 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 GRB14Q14449 540 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PKN1Q16512 942 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 GNPTABQ3T906 1256 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 WWC2Q6AWC2 1192 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 NSMFQ6X4W1 530 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 BLIDQ8IZY5 108 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 CMTR1Q8N1G2 835 aaKnown RBP9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PIBF1Q8WXW3 757 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 IPO9Q96P70 1041 aaKnown RBP9.07□□□□□ -0.96
SSBP3-211ENST00000528787 APBA2Q99767 749 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PHF20Q9BVI0 1012 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 NRBP1Q9UHY1 535 aa9.07□□□□□ -0.96
SSBP3-211ENST00000528787 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
SSBP3-211ENST00000528787 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 STX6O43752 255 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CNMDO75829 334 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CTDNEP1O95476 244 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 HOXC6P09630 235 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 GCFC2P16383 781 aaKnown RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 USP11P51784 963 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 RPS6P62753 249 aaKnown RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 MAP2K5Q13163 448 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 COL9A3Q14050 684 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 NONOQ15233 471 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■■■□□ 16.1
SSBP3-211ENST00000528787 RILPL1Q5EBL4 403 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 ARHGEF16Q5VV41 709 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 KRT40Q6A162 431 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 ATL3Q6DD88 541 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 GIMAP8Q8ND71 665 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CPVLQ9H3G5 476 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 TXNRD2Q9NNW7 524 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 A1CFQ9NQ94 594 aaKnown RBP9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CYP39A1Q9NYL5 469 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 VPS54Q9P1Q0 977 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 CEP131Q9UPN4 1083 aa9.06□□□□□ -0.96
SSBP3-211ENST00000528787 SYNGAP1Q96PV0 1343 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 ADORA2AP29274 412 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 CCND2P30279 289 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-211ENST00000528787 PDE4DQ08499 809 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 STXBP2Q15833 593 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 Q3C1V9 767 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 MFSD14CQ5VZR4 134 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 OLFML2BQ68BL8 750 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 MOXD1Q6UVY6 613 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 RASGRP2Q7LDG7 609 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 NLRX1Q86UT6 975 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 ZIC5Q96T25 663 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 PRDM10Q9NQV6 1147 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 CNPY2Q9Y2B0 182 aa9.05□□□□□ -0.96
SSBP3-211ENST00000528787 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 LAD1O00515 517 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 JAK2O60674 1132 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 MSCO60682 206 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 EIF3JO75822 258 aaKnown RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 TGFB3P10600 412 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 FDPSP14324 419 aaKnown RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 ZNF76P36508 570 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 UBXN2AP68543 259 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 BAATQ14032 418 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 MORN1Q5T089 497 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 PCNX4Q63HM2 1172 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 NIPA1Q7RTP0 329 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 CTU1Q7Z7A3 348 aaKnown RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 NOSTRINQ8IVI9 506 aa9.04□□□□□ -0.96
SSBP3-211ENST00000528787 DIS3L2Q8IYB7 885 aaKnown RBP9.04□□□□□ -0.96
SSBP3-211ENST00000528787 ZNF296Q8WUU4 475 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms