RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 HOXA13P31271 388 aaPredicted RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 NR5A1Q13285 461 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 WDR78Q5VTH9 848 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 FERMT3Q86UX7 667 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 MROH8Q9H579 483 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 TMEM260Q9NX78 707 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 BIN2Q9UBW5 565 aaPredicted RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 ZDHHC9Q9Y397 364 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 GCOM1H8Y6P7 765 aaPredicted RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 M0R2N6 131 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 BRD1O95696 1058 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 POLR2MP0CAP2 368 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 GNL2Q13823 731 aaKnown RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 SLC30A10Q6XR72 485 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 CCAR1Q8IX12 1150 aaKnown RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 REXO1Q8N1G1 1221 aaKnown RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 DNAJC5GQ8N7S2 189 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 CFHR5Q9BXR6 569 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 A1CFQ9NQ94 594 aaKnown RBP23.22■■□□□ 1.31
C11orf49-215ENST00000528488 PCDHA6Q9UN73 950 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 PCDHA8Q9Y5H6 950 aa23.22■■□□□ 1.31
C11orf49-215ENST00000528488 PLXNA1Q9UIW2 1896 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 PIK3CDO00329 1044 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 CLK2P49760 499 aaKnown RBP23.21■■□□□ 1.31
C11orf49-215ENST00000528488 HSD17B4P51659 736 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 NUCB2P80303 420 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 GHRHRQ02643 423 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 JAKMIP3Q5VZ66 844 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 RNF207Q6ZRF8 634 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 FOXP1Q9H334 677 aaPredicted RBP23.21■■□□□ 1.31
C11orf49-215ENST00000528488 CHMP5Q9NZZ3 219 aa23.21■■□□□ 1.31
C11orf49-215ENST00000528488 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
C11orf49-215ENST00000528488 TNFRSF25Q93038 417 aa23.2■■□□□ 1.3
C11orf49-215ENST00000528488 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 U2AF2P26368 475 aaKnown RBP eCLIP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 RPS6P62753 249 aaKnown RBP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 RESTQ13127 1097 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 BAATQ14032 418 aaPredicted RBP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 ANKRD35Q8N283 1001 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 SAMD3Q8N6K7 520 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 CYP39A1Q9NYL5 469 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 F13A1P00488 732 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 MAPK4P31152 587 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 FCHSD1Q86WN1 690 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 TEX2Q8IWB9 1127 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 SYTL5Q8TDW5 730 aaPredicted RBP23.19■■□□□ 1.3
C11orf49-215ENST00000528488 PGBD1Q96JS3 809 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 MMP19Q99542 508 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 SAGE1Q9NXZ1 904 aa23.19■■□□□ 1.3
C11orf49-215ENST00000528488 PFASO15067 1338 aa23.18■■□□□ 1.3
C11orf49-215ENST00000528488 EARS2Q5JPH6 523 aaKnown RBP23.18■■□□□ 1.3
C11orf49-215ENST00000528488 GPR142Q7Z601 462 aa23.18■■□□□ 1.3
C11orf49-215ENST00000528488 NOSTRINQ8IVI9 506 aa23.18■■□□□ 1.3
C11orf49-215ENST00000528488 MAP3K20Q9NYL2 800 aaKnown RBP23.18■■□□□ 1.3
C11orf49-215ENST00000528488 COL20A1Q9P218 1284 aa23.18■■□□□ 1.3
C11orf49-215ENST00000528488 ZNF236Q9UL36 1845 aa23.18■■□□□ 1.3
C11orf49-215ENST00000528488 TCHHQ07283 1943 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 FAM205CA6NFA0 338 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 FCER1AP12319 257 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 AP3B2Q13367 1082 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 KCTD2Q14681 263 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 PIK3AP1Q6ZUJ8 805 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 KRT25Q7Z3Z0 450 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 PLEKHH3Q7Z736 793 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 MAF1Q9H063 256 aa23.17■■□□□ 1.3
C11orf49-215ENST00000528488 CCDC194A0A1B0GVG4 234 aa23.16■■□□□ 1.3
C11orf49-215ENST00000528488 ANO3Q9BYT9 981 aa23.16■■□□□ 1.3
C11orf49-215ENST00000528488 IVNS1ABPQ9Y6Y0 642 aa23.16■■□□□ 1.3
C11orf49-215ENST00000528488 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 FOSP01100 380 aaPredicted RBP23.15■■□□□ 1.3
C11orf49-215ENST00000528488 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 PURBQ96QR8 312 aaKnown RBP23.15■■□□□ 1.3
C11orf49-215ENST00000528488 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 ZSCAN16Q9H4T2 348 aaPredicted RBP23.15■■□□□ 1.3
C11orf49-215ENST00000528488 MCM3APO60318 1980 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 SP3Q02447 781 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 NONOQ15233 471 aaKnown RBP eCLIP23.15■■□□□ 1.3
C11orf49-215ENST00000528488 BRAPQ7Z569 592 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 TAAR1Q96RJ0 339 aa23.15■■□□□ 1.3
C11orf49-215ENST00000528488 POTEB2H3BUK9 544 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 STRNO43815 780 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 PGK2P07205 417 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 PTPREP23469 700 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 CTGFP29279 349 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 LACTBP83111 547 aaPredicted RBP23.14■■□□□ 1.29
C11orf49-215ENST00000528488 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 ABRAQ8N0Z2 381 aa23.14■■□□□ 1.29
C11orf49-215ENST00000528488 GPR25O00155 361 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 ADORA2AP29274 412 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 GRB14Q14449 540 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 INF2Q27J81 1249 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 FAM173BQ6P4H8 233 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 ARHGAP39Q9C0H5 1083 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 WBP1LQ9NX94 342 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 TSKSQ9UJT2 592 aa23.13■■□□□ 1.29
C11orf49-215ENST00000528488 DNAJC25-GNG10A0A024R161 153 aa23.12■■□□□ 1.29
C11orf49-215ENST00000528488 FAM133AQ8N9E0 248 aa23.12■■□□□ 1.29
C11orf49-215ENST00000528488 TBCKQ8TEA7 893 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms