RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 USP17L6PQ6QN14 398 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 ZNF579Q8NAF0 562 aaKnown RBP8.73□□□□□ -1.01
SOX6-211ENST00000528429 RASSF8Q8NHQ8 419 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 PGAP2Q9UHJ9 254 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 TMX2Q9Y320 296 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 GREB1LQ9C091 1923 aaPredicted RBP8.73□□□□□ -1.01
SOX6-211ENST00000528429 A0A087X0B3 334 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 INPP5BP32019 993 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 MRPL12P52815 198 aaKnown RBP8.72□□□□□ -1.01
SOX6-211ENST00000528429 PRKG1Q13976 671 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 GPC2Q8N158 579 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 TIGD1Q96MW7 591 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 MAP7D2Q96T17 732 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 ANO10Q9NW15 660 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 FAM237AA0A1B0GTK4 181 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 MARCH6O60337 910 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 NEMFO60524 1076 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
SOX6-211ENST00000528429 SSR1P43307 286 aaKnown RBP8.72□□□□□ -1.01
SOX6-211ENST00000528429 AFMP43652 599 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 DGKZQ13574 1117 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 IL17AQ16552 155 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 DPCR1Q3MIW9 517 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 CCDC174Q6PII3 467 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 DTHD1Q6ZMT9 781 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 MTMR8Q96EF0 704 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 AMNQ9BXJ7 453 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 SH2D4AQ9H788 454 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 VCPKMTQ9H867 229 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 FBXO28Q9NVF7 368 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
SOX6-211ENST00000528429 PP2D1A8MPX8 630 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 PHF20L1A8MW92 1017 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 BECN2A8MW95 431 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 UVSSAQ2YD98 709 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 CREBRFQ8IUR6 639 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 PROCA1Q8NCQ7 364 aaPredicted RBP8.71□□□□□ -1.01
SOX6-211ENST00000528429 STAMQ92783 540 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 UIMC1Q96RL1 719 aa8.71□□□□□ -1.01
SOX6-211ENST00000528429 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.01
SOX6-211ENST00000528429 GOLGA6L19H0YKK7 550 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 TDP2O95551 362 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 ADCY5O95622 1261 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
SOX6-211ENST00000528429 MTA1Q13330 715 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 POSTNQ15063 836 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 DLK2Q6UY11 383 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 POTEDQ86YR6 584 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 C4orf32Q8N8J7 132 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
SOX6-211ENST00000528429 WRNIP1Q96S55 665 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 PLIN2Q99541 437 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 PCDHA5Q9Y5H7 936 aa8.71□□□□□ -1.02
SOX6-211ENST00000528429 OR52Z1P0C646 297 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 CAPN2P17655 700 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 CASP1P29466 404 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 TXLNAP40222 546 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 KARSQ15046 597 aaKnown RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 ARL6IP4Q66PJ3 421 aaKnown RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 APOBEC3FQ8IUX4 373 aaKnown RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 AOPEPQ8N6M6 819 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 HOXA13P31271 388 aaPredicted RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 UBA7P41226 1012 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 TXKP42681 527 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 ANKRD23Q86SG2 305 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 CHURC1Q8WUH1 139 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 PPP1R9BQ96SB3 815 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
SOX6-211ENST00000528429 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
SOX6-211ENST00000528429 AP5Z1O43299 807 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 SLC37A4O43826 429 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 CTNND1O60716 968 aaKnown RBP8.69□□□□□ -1.02
SOX6-211ENST00000528429 LONP1P36776 959 aaKnown RBP8.69□□□□□ -1.02
SOX6-211ENST00000528429 TECP42680 631 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 MTMR2Q13614 643 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 CALCRLQ16602 461 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 SMARCE1Q969G3 411 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 CCDC34Q96HJ3 373 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 TANGO6Q9C0B7 1094 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 SYNPO2Q9UMS6 1093 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 ARFGEF1Q9Y6D6 1849 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 TPD52L2O43399 206 aaKnown RBP8.69□□□□□ -1.02
SOX6-211ENST00000528429 PEX14O75381 377 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 CAVIN2O95810 425 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 NLRP12P59046 1061 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 SPP2Q13103 211 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 ILDR2Q71H61 639 aa8.69□□□□□ -1.02
SOX6-211ENST00000528429 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms