RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 PDE4DQ08499 809 aa26.99■■□□□ 1.91
PKP3-206ENST00000528036 SEC23AQ15436 765 aa26.99■■□□□ 1.91
PKP3-206ENST00000528036 FSCN1Q16658 493 aaKnown RBP26.99■■□□□ 1.91
PKP3-206ENST00000528036 DUSP28Q4G0W2 176 aa26.99■■□□□ 1.91
PKP3-206ENST00000528036 TRIM43Q96BQ3 446 aaPredicted RBP26.99■■□□□ 1.91
PKP3-206ENST00000528036 RBM47A0AV96 593 aaKnown RBP26.98■■□□□ 1.91
PKP3-206ENST00000528036 DYNC1LI2O43237 492 aaPredicted RBP26.98■■□□□ 1.91
PKP3-206ENST00000528036 DHX16O60231 1041 aaKnown RBP26.98■■□□□ 1.91
PKP3-206ENST00000528036 SMPD1P17405 629 aa26.98■■□□□ 1.91
PKP3-206ENST00000528036 CDK7P50613 346 aa26.98■■□□□ 1.91
PKP3-206ENST00000528036 BRDTQ58F21 947 aaPredicted RBP26.98■■□□□ 1.91
PKP3-206ENST00000528036 FBXO16Q8IX29 292 aaPredicted RBP26.98■■□□□ 1.91
PKP3-206ENST00000528036 MAP4K1Q92918 833 aa26.98■■□□□ 1.91
PKP3-206ENST00000528036 BADQ92934 168 aa26.98■■□□□ 1.91
PKP3-206ENST00000528036 LRCH3Q96II8 777 aa26.98■■□□□ 1.91
PKP3-206ENST00000528036 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.97■■□□□ 1.91
PKP3-206ENST00000528036 CTAGE5O15320 804 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 PTH1RQ03431 593 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 USH1GQ495M9 461 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 EEPD1Q7L9B9 569 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 FBXO11Q86XK2 927 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 SAMD3Q8N6K7 520 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 MTA3Q9BTC8 594 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 WDR11Q9BZH6 1224 aa26.97■■□□□ 1.91
PKP3-206ENST00000528036 MAP3K20Q9NYL2 800 aaKnown RBP26.97■■□□□ 1.91
PKP3-206ENST00000528036 IFIT3O14879 490 aaKnown RBP26.96■■□□□ 1.91
PKP3-206ENST00000528036 EDNRBP24530 442 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 FAAP100Q0VG06 881 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 SLC30A10Q6XR72 485 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 CENPQQ7L2Z9 268 aaPredicted RBP26.96■■□□□ 1.91
PKP3-206ENST00000528036 SH3RF1Q7Z6J0 888 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 SCFD2Q8WU76 684 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 AMNQ9BXJ7 453 aa26.96■■□□□ 1.91
PKP3-206ENST00000528036 KLRF2D3W0D1 207 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 QRICH1Q2TAL8 776 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 CYB5R4Q7L1T6 521 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 IWS1Q96ST2 819 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 JMJD4Q9H9V9 463 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 PDGFCQ9NRA1 345 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 POLR3EQ9NVU0 708 aa26.95■■□□□ 1.9
PKP3-206ENST00000528036 E7EWF7 191 aa26.94■■□□□ 1.9
PKP3-206ENST00000528036 CPT1AP50416 773 aa26.94■■□□□ 1.9
PKP3-206ENST00000528036 WTAPQ15007 396 aa26.94■■□□□ 1.9
PKP3-206ENST00000528036 FAM109BQ6ICB4 259 aaPredicted RBP26.94■■□□□ 1.9
PKP3-206ENST00000528036 NSUN6Q8TEA1 469 aaKnown RBP26.94■■□□□ 1.9
PKP3-206ENST00000528036 PURBQ96QR8 312 aaKnown RBP26.94■■□□□ 1.9
PKP3-206ENST00000528036 MCM3APO60318 1980 aa26.94■■□□□ 1.9
PKP3-206ENST00000528036 DNAH12Q6ZR08 3092 aa26.94■■□□□ 1.9
PKP3-206ENST00000528036 PALM3A6NDB9 673 aaPredicted RBP26.93■■□□□ 1.9
PKP3-206ENST00000528036 KPNA6O60684 536 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 TIMP1P01033 207 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 BEX3Q00994 111 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 FPGSQ05932 587 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 SLC43A3Q8NBI5 491 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 VAT1LQ9HCJ6 419 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 TBX21Q9UL17 535 aa26.93■■□□□ 1.9
PKP3-206ENST00000528036 PPP2R5BQ15173 497 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 CXCL17Q6UXB2 119 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 CATIPQ7Z7H3 387 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 TMTC2Q8N394 836 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 MTMR8Q96EF0 704 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 CPVLQ9H3G5 476 aa26.92■■□□□ 1.9
PKP3-206ENST00000528036 ZBTB5O15062 677 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 ITGA7Q13683 1181 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 TTLL4Q14679 1199 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 GRM4Q14833 912 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 FAM126BQ8IXS8 530 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 DEFB123Q8N688 67 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 SYTL5Q8TDW5 730 aaPredicted RBP26.91■■□□□ 1.9
PKP3-206ENST00000528036 MAP3K14Q99558 947 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 GPHNQ9NQX3 736 aaPredicted RBP26.91■■□□□ 1.9
PKP3-206ENST00000528036 MAD2L2Q9UI95 211 aa26.91■■□□□ 1.9
PKP3-206ENST00000528036 RBM8AQ9Y5S9 174 aaKnown RBP26.91■■□□□ 1.9
PKP3-206ENST00000528036 IRX5P78411 483 aaPredicted RBP26.9■■□□□ 1.9
PKP3-206ENST00000528036 SHHQ15465 462 aa26.9■■□□□ 1.9
PKP3-206ENST00000528036 BMP2KLQ5H9B9 411 aa26.9■■□□□ 1.9
PKP3-206ENST00000528036 MFSD5Q6N075 450 aa26.9■■□□□ 1.9
PKP3-206ENST00000528036 GHRHRQ02643 423 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 PPIGQ13427 754 aaKnown RBP eCLIP26.89■■□□□ 1.9
PKP3-206ENST00000528036 STXBP2Q15833 593 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 TMEM67Q5HYA8 995 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 CASC1Q6TDU7 716 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 STAG2Q8N3U4 1231 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 TMEM199Q8N511 208 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 OR6J1Q8NGC5 347 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 RIOX1Q9H6W3 641 aa26.89■■□□□ 1.9
PKP3-206ENST00000528036 LTBP2Q14767 1821 aa26.88■■□□□ 1.89
PKP3-206ENST00000528036 CD4P01730 458 aa26.88■■□□□ 1.89
PKP3-206ENST00000528036 RMDN3Q96TC7 470 aa26.88■■□□□ 1.89
PKP3-206ENST00000528036 ESYT1Q9BSJ8 1104 aa26.88■■□□□ 1.89
PKP3-206ENST00000528036 DDX49Q9Y6V7 483 aaKnown RBP26.88■■□□□ 1.89
PKP3-206ENST00000528036 SUPT20HL2P0C7V6 817 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 TXNP10599 105 aaKnown RBP26.87■■□□□ 1.89
PKP3-206ENST00000528036 ITGB8P26012 769 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 SMAD3P84022 425 aaKnown RBP26.87■■□□□ 1.89
PKP3-206ENST00000528036 TROAPQ12815 778 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 ARHGEF16Q5VV41 709 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 MB21D2Q8IYB1 491 aaPredicted RBP26.87■■□□□ 1.89
PKP3-206ENST00000528036 TMEM87BQ96K49 555 aa26.87■■□□□ 1.89
PKP3-206ENST00000528036 PCDHA1Q9Y5I3 950 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms