RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SMIM23A6NLE4 172 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 EEF1GP26641 437 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 PTPROQ16827 1216 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 TMBIM4Q9HC24 238 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 SLC39A2Q9NP94 309 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 TRIM37O94972 964 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 SEMA3FQ13275 785 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 TAF4BQ92750 862 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 PACSIN2Q9UNF0 486 aaPredicted RBP13.79□□□□□ -0.2
TSKU-203ENST00000527881 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
TSKU-203ENST00000527881 ZNF263O14978 683 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 MGRN1O60291 552 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 UPP2O95045 317 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 PMS1P54277 932 aaKnown RBP13.79□□□□□ -0.2
TSKU-203ENST00000527881 TNNC1P63316 161 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 ITIH3Q06033 890 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
TSKU-203ENST00000527881 CACNA2D4Q7Z3S7 1137 aa13.79□□□□□ -0.2
TSKU-203ENST00000527881 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
TSKU-203ENST00000527881 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
TSKU-203ENST00000527881 MEA1Q16626 185 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 MFSD6Q6ZSS7 791 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 CCDC26Q8TAB7 109 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
TSKU-203ENST00000527881 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 TLDC2A0PJX2 215 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 EHHADHQ08426 723 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
TSKU-203ENST00000527881 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 LRRC45Q96CN5 670 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 GGT7Q9UJ14 662 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 MST1RQ04912 1400 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 HSD17B3P37058 310 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 EARS2Q5JPH6 523 aaKnown RBP13.78□□□□□ -0.2
TSKU-203ENST00000527881 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
TSKU-203ENST00000527881 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 IP6K1Q92551 441 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 CCDC113Q9H0I3 377 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
TSKU-203ENST00000527881 CCT8L1PA6NM43 557 aa13.77□□□□□ -0.2
TSKU-203ENST00000527881 BMP15O95972 392 aa13.77□□□□□ -0.2
TSKU-203ENST00000527881 SRGNP10124 158 aa13.77□□□□□ -0.2
TSKU-203ENST00000527881 TAX1BP1Q86VP1 789 aa13.77□□□□□ -0.2
TSKU-203ENST00000527881 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.2
TSKU-203ENST00000527881 TANGO6Q9C0B7 1094 aa13.77□□□□□ -0.2
TSKU-203ENST00000527881 PDS5AQ29RF7 1337 aaKnown RBP13.77□□□□□ -0.2
TSKU-203ENST00000527881 MYH10P35580 1976 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 PSMD2Q13200 908 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 ARMC9Q7Z3E5 817 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 KCNV2Q8TDN2 545 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
TSKU-203ENST00000527881 TLR10Q9BXR5 811 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 GOPCQ9HD26 462 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 GDF3Q9NR23 364 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 RAD51CO43502 376 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 CAND2O75155 1236 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 DNAJC8O75937 253 aaPredicted RBP13.77□□□□□ -0.21
TSKU-203ENST00000527881 PRLRP16471 622 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 MAEAQ7L5Y9 396 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 AGAP11Q8TF27 550 aa13.77□□□□□ -0.21
TSKU-203ENST00000527881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSKU-203ENST00000527881 SMIM24O75264 130 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 INHBEP58166 350 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 ARID5AQ03989 594 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 CD302Q8IX05 232 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 P3H4Q92791 437 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 CHMP6Q96FZ7 201 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 PURBQ96QR8 312 aaKnown RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 ELAC2Q9BQ52 826 aaKnown RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 SLIT1O75093 1534 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 WNT7AO00755 349 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
TSKU-203ENST00000527881 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 ZNF662Q6ZS27 426 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 CCT6BQ92526 530 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 TATDN2Q93075 761 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 KDM4CQ9H3R0 1056 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 CD2APQ9Y5K6 639 aa13.76□□□□□ -0.21
TSKU-203ENST00000527881 NEFHP12036 1026 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms