RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KLHDC9Q8NEP7 349 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 B4DLN1 442 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 MRPL12P52815 198 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 GJA9P57773 515 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 IQSEC1Q6DN90 963 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 TAPT1Q6NXT6 567 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 EEPD1Q7L9B9 569 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 FBXO16Q8IX29 292 aaPredicted RBP30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 TBC1D5Q92609 795 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 FERMT2Q96AC1 680 aa30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 UPF3AQ9H1J1 476 aaKnown RBP30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 COLQQ9Y215 455 aaPredicted RBP30.61■■■□□ 2.49
TSPAN4-217ENST00000527644 CYTH3O43739 400 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 PPP1R11O60927 126 aaPredicted RBP30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 SLC34A2O95436 690 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 CST5P28325 142 aaPredicted RBP30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 HOMER1Q86YM7 354 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 PIGSQ96S52 555 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 MYL10Q9BUA6 226 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 PCDHA1Q9Y5I3 950 aa30.6■■■□□ 2.49
TSPAN4-217ENST00000527644 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 MOXD2PA6NHM9 499 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 REC8O95072 547 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 C6orf222P0C671 652 aaPredicted RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 CALM1P0DP23 149 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 CALM2P0DP24 149 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 CALM3P0DP25 149 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 SMARCA1P28370 1054 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 CHRDL2Q6WN34 429 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 NOL8Q76FK4 1167 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 DHX32Q7L7V1 743 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 SYTL5Q8TDW5 730 aaPredicted RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 KCNB2Q92953 911 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 LZTS2Q9BRK4 669 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 LRRC2Q9BYS8 371 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 PDGFCQ9NRA1 345 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 ZMYND8Q9ULU4 1186 aaPredicted RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 GNEQ9Y223 722 aaKnown RBP30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 SLC12A7Q9Y666 1083 aa30.59■■■□□ 2.49
TSPAN4-217ENST00000527644 PNMA6FA0A0J9YX94 578 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 EDNRBP24530 442 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 GNAQP50148 359 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 RTP1P59025 263 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 NKX3-2P78367 333 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 EXOSC10Q01780 885 aaKnown RBP30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 PDE4DQ08499 809 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 SNX17Q15036 470 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 KCNA10Q16322 511 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 ADCK5Q3MIX3 580 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 C1orf53Q5VUE5 145 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 CCSAPQ6IQ19 270 aaPredicted RBP30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 SGMS1Q86VZ5 419 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 PCSK9Q8NBP7 692 aaKnown RBP30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 LRRC37A2A6NM11 1700 aa30.58■■■□□ 2.49
TSPAN4-217ENST00000527644 BAZ2BQ9UIF8 2168 aaKnown RBP30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 HMGB1P09429 215 aaKnown RBP30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 SMPD1P17405 629 aa30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 ACLYP53396 1101 aa30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 HABP4Q5JVS0 413 aaKnown RBP30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 SAMD3Q8N6K7 520 aa30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 SPZ1Q9BXG8 430 aa30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 MAP3K20Q9NYL2 800 aaKnown RBP30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 Q9Y3F1 56 aa30.57■■■□□ 2.48
TSPAN4-217ENST00000527644 A0A1W2PQ45 241 aaPredicted RBP30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 A0A1W2PQY0 241 aa30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 MYADML2A6NDP7 307 aa30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 HSPA4P34932 840 aa30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 GHRHRQ02643 423 aa30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 NSUN6Q8TEA1 469 aaKnown RBP30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 TAAR1Q96RJ0 339 aa30.56■■■□□ 2.48
TSPAN4-217ENST00000527644 DNAH12Q6ZR08 3092 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 RBM47A0AV96 593 aaKnown RBP30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 OPLAHO14841 1288 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 CFBP00751 764 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 SYN1P17600 705 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 GNASQ5JWF2 1037 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 AP5M1Q9H0R1 490 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 COL20A1Q9P218 1284 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 ATP11BQ9Y2G3 1177 aa30.55■■■□□ 2.48
TSPAN4-217ENST00000527644 HSD17B4P51659 736 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 SYNE3Q6ZMZ3 975 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 TLK2Q86UE8 772 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 RMDN3Q96TC7 470 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 WDR11Q9BZH6 1224 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 PRO3102Q9H379 93 aa30.54■■■□□ 2.48
TSPAN4-217ENST00000527644 CTAGE5O15320 804 aa30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 EPB41L2O43491 1005 aaKnown RBP30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 IRX5P78411 483 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 DUSP28Q4G0W2 176 aa30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 FANCBQ8NB91 859 aa30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 RRP36Q96EU6 259 aaKnown RBP30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 IWS1Q96ST2 819 aa30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 STARD7Q9NQZ5 370 aa30.53■■■□□ 2.48
TSPAN4-217ENST00000527644 DYNC1LI2O43237 492 aaPredicted RBP30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 ASGR1P07306 291 aa30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 RXRAP19793 462 aa30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 TRIM60Q495X7 471 aa30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 SRBD1Q8N5C6 995 aaKnown RBP30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 TCEANC2Q96MN5 208 aa30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 GLT1D1Q96MS3 346 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms