RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 SH3RF1Q7Z6J0 888 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 BADQ92934 168 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 IL25Q9H293 177 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 PRDM6Q9NQX0 595 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 TNKSO95271 1327 aa15.67■□□□□ 0.1
CAPN1-207ENST00000527189 A0A0U1RQG5 324 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 ARVCFO00192 962 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 PARP1P09874 1014 aaKnown RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 GOLGA8HP0CJ92 632 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 RAG1P15918 1043 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 SMPD1P17405 629 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 RPS6P62753 249 aaKnown RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 IFIT1BQ5T764 474 aaKnown RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-207ENST00000527189 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 VTI1AQ96AJ9 217 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 UBA5Q9GZZ9 404 aa15.66■□□□□ 0.1
CAPN1-207ENST00000527189 RBM47A0AV96 593 aaKnown RBP15.65■□□□□ 0.1
CAPN1-207ENST00000527189 DYNC1LI2O43237 492 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-207ENST00000527189 CALML3P27482 149 aa15.65■□□□□ 0.1
CAPN1-207ENST00000527189 FSCN1Q16658 493 aaKnown RBP15.65■□□□□ 0.1
CAPN1-207ENST00000527189 DUSP28Q4G0W2 176 aa15.65■□□□□ 0.1
CAPN1-207ENST00000527189 FBXO16Q8IX29 292 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-207ENST00000527189 PURBQ96QR8 312 aaKnown RBP15.65■□□□□ 0.1
CAPN1-207ENST00000527189 PDGFCQ9NRA1 345 aa15.65■□□□□ 0.1
CAPN1-207ENST00000527189 ABCB11O95342 1321 aa15.65■□□□□ 0.1
CAPN1-207ENST00000527189 LTBP2Q14767 1821 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 TLR3O15455 904 aaKnown RBP15.64■□□□□ 0.09
CAPN1-207ENST00000527189 SGSM2O43147 1006 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 TIMP1P01033 207 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 EDNRBP24530 442 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 IRX5P78411 483 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-207ENST00000527189 SEC23AQ15436 765 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 SHHQ15465 462 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 CDC37Q16543 378 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-207ENST00000527189 EEPD1Q7L9B9 569 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 MCF2L2Q86YR7 1114 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
CAPN1-207ENST00000527189 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
CAPN1-207ENST00000527189 CYP21A2P08686 494 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 ITGB8P26012 769 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 BEX3Q00994 111 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 PTH1RQ03431 593 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 PDE4DQ08499 809 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 SLC30A10Q6XR72 485 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 MAP4K1Q92918 833 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 TBX21Q9UL17 535 aa15.63■□□□□ 0.09
CAPN1-207ENST00000527189 MRPL11Q9Y3B7 192 aaKnown RBP15.63■□□□□ 0.09
CAPN1-207ENST00000527189 ERICH2A1L162 156 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 FPGSQ05932 587 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 TRAF1Q13077 416 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
CAPN1-207ENST00000527189 USH1GQ495M9 461 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 CXCL17Q6UXB2 119 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 CYB5R4Q7L1T6 521 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 FAM126BQ8IXS8 530 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 SAMD3Q8N6K7 520 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 GUCD1Q96NT3 240 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 JMJD4Q9H9V9 463 aa15.62■□□□□ 0.09
CAPN1-207ENST00000527189 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
CAPN1-207ENST00000527189 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
CAPN1-207ENST00000527189 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-207ENST00000527189 KLRF2D3W0D1 207 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 DHX16O60231 1041 aaKnown RBP15.61■□□□□ 0.09
CAPN1-207ENST00000527189 CD4P01730 458 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 CPT1AP50416 773 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-207ENST00000527189 C9orf50Q5SZB4 431 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 MFSD5Q6N075 450 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 RALYLQ86SE5 291 aaKnown RBP15.61■□□□□ 0.09
CAPN1-207ENST00000527189 NSUN6Q8TEA1 469 aaKnown RBP15.61■□□□□ 0.09
CAPN1-207ENST00000527189 SCFD2Q8WU76 684 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 MTMR8Q96EF0 704 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 MTA3Q9BTC8 594 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 AMNQ9BXJ7 453 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 VAT1LQ9HCJ6 419 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
CAPN1-207ENST00000527189 LCTP09848 1927 aa15.6■□□□□ 0.09
CAPN1-207ENST00000527189 E7EWF7 191 aa15.6■□□□□ 0.09
CAPN1-207ENST00000527189 IFIT3O14879 490 aaKnown RBP15.6■□□□□ 0.09
CAPN1-207ENST00000527189 KPNA6O60684 536 aa15.6■□□□□ 0.09
CAPN1-207ENST00000527189 SMAD3P84022 425 aaKnown RBP15.6■□□□□ 0.09
CAPN1-207ENST00000527189 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
CAPN1-207ENST00000527189 SYTL5Q8TDW5 730 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-207ENST00000527189 MAD2L2Q9UI95 211 aa15.6■□□□□ 0.09
CAPN1-207ENST00000527189 ZBTB5O15062 677 aa15.59■□□□□ 0.09
CAPN1-207ENST00000527189 GHRHRQ02643 423 aa15.59■□□□□ 0.09
CAPN1-207ENST00000527189 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms