RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SCN5AQ14524 2016 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 M0R2C6 588 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 RNF113AO15541 343 aaKnown RBP15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 ARHGEF15O94989 841 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 MYL3P08590 195 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 ACTN1P12814 892 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 GNAT2P19087 354 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 TFAP4Q01664 338 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 FAM47CQ5HY64 1035 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 ECHDC1Q9NTX5 307 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 POLR3EQ9NVU0 708 aa15.45■□□□□ 0.06
CLNS1A-207ENST00000527133 TLL1O43897 1013 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 PURAQ00577 322 aaKnown RBP15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 TAP1Q03518 808 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 PDE4BQ07343 736 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 DUSP28Q4G0W2 176 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 TMEM31Q5JXX7 168 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 RASGRP2Q7LDG7 609 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 IFNL3Q8IZI9 196 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 PPP1R13LQ8WUF5 828 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 SLC9A7Q96T83 725 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 WDR11Q9BZH6 1224 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 CCPG1Q9ULG6 757 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 PRR12Q9ULL5 1215 aa15.44■□□□□ 0.06
CLNS1A-207ENST00000527133 PATL2C9JE40 543 aaKnown RBP15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 RFC2P35250 354 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 CPT1AP50416 773 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 TSHZ3Q63HK5 1081 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 HERC6Q8IVU3 1022 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 MORC4Q8TE76 937 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 HLA-CQ95604 372 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 MTG1Q9BT17 334 aaPredicted RBP15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 FTOQ9C0B1 505 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 GPHNQ9NQX3 736 aaPredicted RBP15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 LCTP09848 1927 aa15.43■□□□□ 0.06
CLNS1A-207ENST00000527133 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 PLA2G6O60733 806 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 SLC3A2P08195 630 aaKnown RBP15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 GRB10Q13322 594 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 NBPF20Q3BBV1 942 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 OR6J1Q8NGC5 347 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 NACAP1Q9BZK3 213 aa15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 ARIH1Q9Y4X5 557 aaPredicted RBP15.42■□□□□ 0.06
CLNS1A-207ENST00000527133 FAM86C2PA6NEL3 165 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 IQCF3P0C7M6 154 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 ALDH5A1P51649 535 aaPredicted RBP15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 PPARAQ07869 468 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 KHSRPQ92945 711 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 GPATCH3Q96I76 525 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 NAPBQ9H115 298 aa15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 ADD3Q9UEY8 706 aaKnown RBP15.41■□□□□ 0.06
CLNS1A-207ENST00000527133 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 NFIBO00712 420 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 NMT2O60551 498 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 ICAM1P05362 532 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 CCDC96Q2M329 555 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 BRDTQ58F21 947 aaPredicted RBP15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 PIEZO1Q92508 2521 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 TANC1Q9C0D5 1861 aa15.4■□□□□ 0.06
CLNS1A-207ENST00000527133 SCN10AQ9Y5Y9 1956 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 RBM47A0AV96 593 aaKnown RBP15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 PTPDC1A2A3K4 754 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 LPXNO60711 386 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 SLC16A2P36021 539 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 BFSP2Q13515 415 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 PPP2R5BQ15173 497 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 NFRKBQ6P4R8 1299 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 RANBP17Q9H2T7 1088 aaKnown RBP15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 CHMP4BQ9H444 224 aaKnown RBP15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 C11orf16Q9NQ32 467 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 IL17RBQ9NRM6 502 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 NOD1Q9Y239 953 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 BRWD1Q9NSI6 2320 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 RAD50Q92878 1312 aa15.39■□□□□ 0.05
CLNS1A-207ENST00000527133 COL4A4P53420 1690 aaPredicted RBP15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 LCHNA4D1U4 455 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 GPR37L1O60883 481 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 CALML3P27482 149 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 KCNJ6P48051 423 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 TTBK2Q6IQ55 1244 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 TMCO2Q7Z6W1 182 aaPredicted RBP15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 COPS5Q92905 334 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 INCENPQ9NQS7 918 aa15.38■□□□□ 0.05
CLNS1A-207ENST00000527133 MUC6Q6W4X9 2439 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms