RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CRYGNQ8WXF5 182 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 SDF4Q9BRK5 362 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 TMEM60Q9H2L4 133 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 GRPEL1Q9HAV7 217 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 USP25Q9UHP3 1055 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 CCPG1Q9ULG6 757 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 PTPRFP10586 1907 aa23.27■■□□□ 1.32
SMCO4-203ENST00000526869 UTRNP46939 3433 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 CYP3A7-CYP3A51PA0A087WV96 503 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 SPDYE3A6NKU9 549 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 GCOM1H8Y6P7 765 aaPredicted RBP23.26■■□□□ 1.31
SMCO4-203ENST00000526869 EDIL3O43854 480 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 POLR2MP0CAP2 368 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 CYP3A7P24462 503 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 SREBF1P36956 1147 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 OAZ1P54368 228 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 IL17AQ16552 155 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 AK8Q96MA6 479 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 MBOAT7Q96N66 472 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 ADAMTS5Q9UNA0 930 aa23.26■■□□□ 1.31
SMCO4-203ENST00000526869 MYH7BA7E2Y1 1941 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 RBBP6Q7Z6E9 1792 aaKnown RBP23.25■■□□□ 1.31
SMCO4-203ENST00000526869 CXCL11O14625 94 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 DSG3P32926 999 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 PPIL2Q13356 520 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 KRBA2Q6ZNG9 492 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 CATSPERGQ6ZRH7 1159 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 SYMPKQ92797 1274 aaKnown RBP23.25■■□□□ 1.31
SMCO4-203ENST00000526869 MTMR9Q96QG7 549 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 EHMT1Q9H9B1 1298 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 MAP3K20Q9NYL2 800 aaKnown RBP23.25■■□□□ 1.31
SMCO4-203ENST00000526869 HOOK1Q9UJC3 728 aaKnown RBP23.25■■□□□ 1.31
SMCO4-203ENST00000526869 CLEC11AQ9Y240 323 aa23.25■■□□□ 1.31
SMCO4-203ENST00000526869 CTDP1Q9Y5B0 961 aaPredicted RBP23.25■■□□□ 1.31
SMCO4-203ENST00000526869 VWA5AO00534 786 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 TTLL12Q14166 644 aaPredicted RBP23.24■■□□□ 1.31
SMCO4-203ENST00000526869 COG2Q14746 738 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 SPECC1Q5M775 1068 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 LDLRAD1Q5T700 205 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 KANK3Q6NY19 840 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 SASS6Q6UVJ0 657 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 CKAP2LQ8IYA6 745 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 PROCA1Q8NCQ7 364 aaPredicted RBP23.24■■□□□ 1.31
SMCO4-203ENST00000526869 MAF1Q9H063 256 aa23.24■■□□□ 1.31
SMCO4-203ENST00000526869 TDP2O95551 362 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 CYP3A4P08684 503 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 TXLNAP40222 546 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 HSD17B4P51659 736 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 ARHGAP4P98171 946 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 TYRO3Q06418 890 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 CALCRLQ16602 461 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 REPS2Q8NFH8 660 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 AGBL1Q96MI9 1066 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 P2RX7Q99572 595 aaKnown RBP23.23■■□□□ 1.31
SMCO4-203ENST00000526869 ELP3Q9H9T3 547 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 KCNH4Q9UQ05 1017 aa23.23■■□□□ 1.31
SMCO4-203ENST00000526869 A0A0G2JLL6 359 aaPredicted RBP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 ATP2A1O14983 1001 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 CAVIN2O95810 425 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 TAL1P17542 331 aaPredicted RBP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 CIITAP33076 1130 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 FXR2P51116 673 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 FKBP1BP68106 108 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 SAMD1Q6SPF0 538 aaPredicted RBP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 USP49Q70CQ1 688 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 PRRT2Q7Z6L0 340 aaPredicted RBP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 CNNM3Q8NE01 707 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 CLEC4DQ8WXI8 215 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 ATG4CQ96DT6 458 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 EPSTI1Q96J88 318 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 HOXC10Q9NYD6 342 aa23.22■■□□□ 1.31
SMCO4-203ENST00000526869 DDX25Q9UHL0 483 aaKnown RBP23.22■■□□□ 1.31
SMCO4-203ENST00000526869 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 POLR2DO15514 142 aaKnown RBP23.21■■□□□ 1.31
SMCO4-203ENST00000526869 SLC37A4O43826 429 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 CFBP00751 764 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 LONRF3Q496Y0 759 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 CLMNQ96JQ2 1002 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 CCSER1Q9C0I3 900 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
SMCO4-203ENST00000526869 KIAA1468Q9P260 1216 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 RABGAP1Q9Y3P9 1069 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 A0A0G2JMZ2 1700 aa23.21■■□□□ 1.31
SMCO4-203ENST00000526869 ACTN4O43707 911 aaKnown RBP23.2■■□□□ 1.3
SMCO4-203ENST00000526869 HOXA7P31268 230 aaPredicted RBP23.2■■□□□ 1.3
SMCO4-203ENST00000526869 HOXA13P31271 388 aaPredicted RBP23.2■■□□□ 1.3
SMCO4-203ENST00000526869 TMEM266Q2M3C6 531 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 Q4G0T1 1027 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 IGSF22Q8N9C0 903 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 RAB34Q9BZG1 259 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 SMCHD1A6NHR9 2005 aa23.2■■□□□ 1.3
SMCO4-203ENST00000526869 TBX3O15119 743 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 SLFN14P0C7P3 912 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 POTEIP0CG38 1075 aa23.19■■□□□ 1.3
SMCO4-203ENST00000526869 POTEJP0CG39 1038 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms