RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 RALYLQ86SE5 291 aaKnown RBP13.58□□□□□ -0.24
HIF3A-209ENST00000525854 ADGRF4Q8IZF3 695 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
HIF3A-209ENST00000525854 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 ABCB11O95342 1321 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 MCM3APO60318 1980 aa13.58□□□□□ -0.24
HIF3A-209ENST00000525854 ERICH2A1L162 156 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 ARVCFO00192 962 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 CYP21A2P08686 494 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 CDK7P50613 346 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
HIF3A-209ENST00000525854 BEX3Q00994 111 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 PTH1RQ03431 593 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 FAAP100Q0VG06 881 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
HIF3A-209ENST00000525854 SEC23AQ15436 765 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 MCF2L2Q86YR7 1114 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 DDX49Q9Y6V7 483 aaKnown RBP13.57□□□□□ -0.24
HIF3A-209ENST00000525854 LAMA3Q16787 3333 aa13.57□□□□□ -0.24
HIF3A-209ENST00000525854 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
HIF3A-209ENST00000525854 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 CYB5R4Q7L1T6 521 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 FBXO11Q86XK2 927 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 DEFB123Q8N688 67 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 NCOA7Q8NI08 942 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
HIF3A-209ENST00000525854 MRPL11Q9Y3B7 192 aaKnown RBP13.56□□□□□ -0.24
HIF3A-209ENST00000525854 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
HIF3A-209ENST00000525854 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 E7EWF7 191 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 IFIT3O14879 490 aaKnown RBP13.55□□□□□ -0.24
HIF3A-209ENST00000525854 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.24
HIF3A-209ENST00000525854 TIMP1P01033 207 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 EDNRBP24530 442 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 ITGB8P26012 769 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 FPGSQ05932 587 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 TRAF1Q13077 416 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 SHHQ15465 462 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 QRICH1Q2TAL8 776 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 BRDTQ58F21 947 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-209ENST00000525854 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
HIF3A-209ENST00000525854 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 MAP4K1Q92918 833 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 AMNQ9BXJ7 453 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 TBX21Q9UL17 535 aa13.55□□□□□ -0.24
HIF3A-209ENST00000525854 SZT2Q5T011 3432 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 DNAH12Q6ZR08 3092 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-209ENST00000525854 CPT1AP50416 773 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 ITGA7Q13683 1181 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 WTAPQ15007 396 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 FAM109BQ6ICB4 259 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-209ENST00000525854 FAM126BQ8IXS8 530 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-209ENST00000525854 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
HIF3A-209ENST00000525854 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 ZBTB5O15062 677 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-209ENST00000525854 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-209ENST00000525854 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
HIF3A-209ENST00000525854 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
HIF3A-209ENST00000525854 KPNA6O60684 536 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 CD4P01730 458 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 PTGS1P23219 599 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 SMAD3P84022 425 aaKnown RBP13.52□□□□□ -0.25
HIF3A-209ENST00000525854 PPIGQ13427 754 aaKnown RBP eCLIP13.52□□□□□ -0.25
HIF3A-209ENST00000525854 GRM4Q14833 912 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 MFSD5Q6N075 450 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 Q7L0L9 218 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 TMEM199Q8N511 208 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 SAMD3Q8N6K7 520 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 MTMR8Q96EF0 704 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
HIF3A-209ENST00000525854 MTA3Q9BTC8 594 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 MTMR10Q9NXD2 777 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.25
HIF3A-209ENST00000525854 LRRC37A2A6NM11 1700 aa13.52□□□□□ -0.25
HIF3A-209ENST00000525854 LCTP09848 1927 aa13.51□□□□□ -0.25
HIF3A-209ENST00000525854 A6NJR5 290 aa13.51□□□□□ -0.25
HIF3A-209ENST00000525854 CFBP00751 764 aa13.51□□□□□ -0.25
HIF3A-209ENST00000525854 TXNP10599 105 aaKnown RBP13.51□□□□□ -0.25
HIF3A-209ENST00000525854 EPHB4P54760 987 aa13.51□□□□□ -0.25
HIF3A-209ENST00000525854 TROAPQ12815 778 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms