RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 KRTAP4-12Q9BQ66 201 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 KCNH6Q9H252 994 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 TTF2Q9UNY4 1162 aaKnown RBP9.29□□□□□ -0.92
NEDD8-203ENST00000524927 ABCC4O15439 1325 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 ADGRA2Q96PE1 1338 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 KIF20BQ96Q89 1820 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 CPB1P15086 417 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 SELPP16109 830 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
NEDD8-203ENST00000524927 FAM35AQ86V20 835 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 CCNJLQ8IV13 435 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 NECAB3Q96P71 396 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-203ENST00000524927 TCF12Q99081 682 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 RASSF4Q9H2L5 321 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 PAK6Q9NQU5 681 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-203ENST00000524927 POLKQ9UBT6 870 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 EPG5Q9HCE0 2579 aa9.28□□□□□ -0.92
NEDD8-203ENST00000524927 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
NEDD8-203ENST00000524927 SPTBN4Q9H254 2564 aa9.27□□□□□ -0.92
NEDD8-203ENST00000524927 CFAP54Q96N23 3096 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 ZSWIM8A7E2V4 1837 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 XRCC5P13010 732 aaKnown RBP9.27□□□□□ -0.93
NEDD8-203ENST00000524927 ATP11AP98196 1134 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 ARTNQ5T4W7 220 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 HS2ST1Q7LGA3 356 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 METTL16Q86W50 562 aaKnown RBP9.27□□□□□ -0.93
NEDD8-203ENST00000524927 ASAP3Q8TDY4 903 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 ABCB6Q9NP58 842 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
NEDD8-203ENST00000524927 PDE2AO00408 941 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-203ENST00000524927 SMNDC1O75940 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD8-203ENST00000524927 PSMC4P43686 418 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 ST13P50502 369 aaKnown RBP9.26□□□□□ -0.93
NEDD8-203ENST00000524927 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 AKNAD1Q5T1N1 836 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 CEP135Q66GS9 1140 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 ZNF790Q6PG37 636 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-203ENST00000524927 BRI3BPQ8WY22 251 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 HHIPQ96QV1 700 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 ZCCHC17Q9NP64 241 aaKnown RBP9.26□□□□□ -0.93
NEDD8-203ENST00000524927 GGT7Q9UJ14 662 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
NEDD8-203ENST00000524927 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 METTL12A8MUP2 240 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 PRR33A8MZF0 331 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 CTGFP29279 349 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 HLFQ16534 295 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 ERMP1Q7Z2K6 904 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 APOBEC3FQ8IUX4 373 aaKnown RBP9.25□□□□□ -0.93
NEDD8-203ENST00000524927 NXPE3Q969Y0 559 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 GMLQ99445 158 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 LBHD1Q9BQE6 289 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-203ENST00000524927 C11orf49Q9H6J7 331 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 CCSER2Q9H7U1 834 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 ZFYVE1Q9HBF4 777 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-203ENST00000524927 COL3A1P02461 1466 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-203ENST00000524927 ATRXP46100 2492 aa9.25□□□□□ -0.93
NEDD8-203ENST00000524927 CCL15-CCL14A0A0B4J2E2 113 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 KRT37O76014 449 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 ITGB8P26012 769 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 GRIA4P48058 902 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 CCL15Q16663 113 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 FAM43AQ8N2R8 423 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 PLD4Q96BZ4 506 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 EYA3Q99504 573 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 ZFP64Q9NPA5 681 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 FZD1Q9UP38 647 aa9.24□□□□□ -0.93
NEDD8-203ENST00000524927 KMT2BQ9UMN6 2715 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-203ENST00000524927 A0A096LPE4 126 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 FAM86C2PA6NEL3 165 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 WNT10BO00744 389 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
NEDD8-203ENST00000524927 GTF2A2P52657 109 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 RAD51AP2Q09MP3 1159 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 ADGRE1Q14246 886 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 MBTPS1Q14703 1052 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 CCDC85BQ15834 202 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-203ENST00000524927 ANKRD13AQ8IZ07 590 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 BHLHE41Q9C0J9 482 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-203ENST00000524927 TGIF2Q9GZN2 237 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-203ENST00000524927 SCN9AQ15858 1988 aa9.23□□□□□ -0.93
NEDD8-203ENST00000524927 A0A0A0MRY4 1105 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 ADCY3O60266 1144 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-203ENST00000524927 PRKCZQ05513 592 aa9.22□□□□□ -0.93
NEDD8-203ENST00000524927 AAK1Q2M2I8 961 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms