RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 KLRF2D3W0D1 207 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 SMPD1P17405 629 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 TLE2Q04725 743 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 IQSEC1Q6DN90 963 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 PCSK9Q8NBP7 692 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 MAF1Q9H063 256 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 SLC27A2O14975 620 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 PTGS1P23219 599 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 IGDCC4Q8TDY8 1250 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 PRDM5Q9NQX1 630 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 PRKAG2Q9UGJ0 569 aa13.01□□□□□ -0.33
TRAPPC4-204ENST00000524797 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 ASGR1P07306 291 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 EDNRBP24530 442 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 BEX3Q00994 111 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 GNASQ5JWF2 1037 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 DNERQ8NFT8 737 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 ANO2Q9NQ90 1003 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 MRPL11Q9Y3B7 192 aaKnown RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 Q9Y3F1 56 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 ELP1O95163 1332 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 TRIM43BA6NCK2 446 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 DYNC1LI2O43237 492 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 PDE4DQ08499 809 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 NECTIN1Q15223 517 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 MCF2L2Q86YR7 1114 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 SYTL5Q8TDW5 730 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 TRIM43Q96BQ3 446 aaPredicted RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 GLT1D1Q96MS3 346 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 MPHOSPH6Q99547 160 aaKnown RBP13□□□□□ -0.33
TRAPPC4-204ENST00000524797 LY9Q9HBG7 655 aa13□□□□□ -0.33
TRAPPC4-204ENST00000524797 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 PRC1O43663 620 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 CDC45O75419 566 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 CLTBP09497 229 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 TROAPQ12815 778 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 ANKRD33Q7Z3H0 272 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 CATIPQ7Z7H3 387 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 TDHQ8IZJ6 230 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 TAAR1Q96RJ0 339 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 MTA3Q9BTC8 594 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
TRAPPC4-204ENST00000524797 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 B4DLN1 442 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 ZBTB5O15062 677 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 KIAA0355O15063 1070 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 CDK7P50613 346 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 DUSP28Q4G0W2 176 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 WDR11Q9BZH6 1224 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 MYH7BA7E2Y1 1941 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 OPLAHO14841 1288 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 MCM5P33992 734 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 GHRHRQ02643 423 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 BADQ92934 168 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 VTI1AQ96AJ9 217 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 PIGSQ96S52 555 aa12.98□□□□□ -0.33
TRAPPC4-204ENST00000524797 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 ARVCFO00192 962 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 CYTH3O43739 400 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 ZEB2O60315 1214 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 DDAH1O94760 285 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 TMEM87BQ96K49 555 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
TRAPPC4-204ENST00000524797 MROH7Q68CQ1 1323 aa12.96□□□□□ -0.33
TRAPPC4-204ENST00000524797 CABYRO75952 493 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms