RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CAPN2P17655 700 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 PDIA3P30101 505 aaKnown RBP13.87□□□□□ -0.19
CLN8-207ENST00000524258 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
CLN8-207ENST00000524258 HSD17B4P51659 736 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 NTRK3Q16288 839 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 RNF207Q6ZRF8 634 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 KIF2CQ99661 725 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
CLN8-207ENST00000524258 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
CLN8-207ENST00000524258 MRPL11Q9Y3B7 192 aaKnown RBP13.87□□□□□ -0.19
CLN8-207ENST00000524258 PCDHA1Q9Y5I3 950 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
CLN8-207ENST00000524258 LOC102724159A0A0B4J2E5 919 aa13.86□□□□□ -0.19
CLN8-207ENST00000524258 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
CLN8-207ENST00000524258 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
CLN8-207ENST00000524258 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
CLN8-207ENST00000524258 PWP2Q15269 919 aaKnown RBP13.86□□□□□ -0.19
CLN8-207ENST00000524258 RTN1Q16799 776 aa13.86□□□□□ -0.19
CLN8-207ENST00000524258 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
CLN8-207ENST00000524258 TAAR1Q96RJ0 339 aa13.86□□□□□ -0.19
CLN8-207ENST00000524258 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 COL6A1P12109 1028 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 CALML3P27482 149 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 DNERQ8NFT8 737 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
CLN8-207ENST00000524258 PIBF1Q8WXW3 757 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 RRP36Q96EU6 259 aaKnown RBP13.85□□□□□ -0.19
CLN8-207ENST00000524258 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
CLN8-207ENST00000524258 PDE4DIPQ5VU43 2346 aa13.85□□□□□ -0.19
CLN8-207ENST00000524258 MCM3APO60318 1980 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 ASB14A6NK59 587 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
CLN8-207ENST00000524258 PPP2R5BQ15173 497 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 TMEM63BQ5T3F8 832 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 MCF2L2Q86YR7 1114 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 LENG1Q96BZ8 264 aaPredicted RBP13.84□□□□□ -0.19
CLN8-207ENST00000524258 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
CLN8-207ENST00000524258 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
CLN8-207ENST00000524258 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 PDRG1Q9NUG6 133 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
CLN8-207ENST00000524258 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 MEIS2O14770 477 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 CTAGE5O15320 804 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 MSCO60682 206 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 CNGA1P29973 690 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 METAP2P50579 478 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLN8-207ENST00000524258 NKX3-2P78367 333 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 MLLT1Q03111 559 aaPredicted RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 PKN1Q16512 942 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 ANO1Q5XXA6 986 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 NCOA5Q9HCD5 579 aaKnown RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 ADD3Q9UEY8 706 aaKnown RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 CNPY2Q9Y2B0 182 aa13.83□□□□□ -0.2
CLN8-207ENST00000524258 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
CLN8-207ENST00000524258 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 ADAMTS4O75173 837 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 FARP2O94887 1054 aaPredicted RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 CFBP00751 764 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 AKR1A1P14550 325 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 PTGS1P23219 599 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 HOXA13P31271 388 aaPredicted RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 FGD1P98174 961 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 TRAF1Q13077 416 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 PAWRQ96IZ0 340 aaKnown RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 FAM184BQ9ULE4 1060 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 TPCN1Q9ULQ1 816 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
CLN8-207ENST00000524258 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
CLN8-207ENST00000524258 STXBP3O00186 592 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 RGS20O76081 388 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 IFNAR1P17181 557 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 AK2P54819 239 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 LRRC41Q15345 812 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 FBXO16Q8IX29 292 aaPredicted RBP13.81□□□□□ -0.2
CLN8-207ENST00000524258 KLHDC9Q8NEP7 349 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 GPKOWQ92917 476 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CLN8-207ENST00000524258 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
CLN8-207ENST00000524258 PDCD2LQ9BRP1 358 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms