RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.13□□□□□ -1.27
FAM49B-228ENST00000523993 LRRC37A2A6NM11 1700 aa7.13□□□□□ -1.27
FAM49B-228ENST00000523993 MINDY4BA8MYZ0 360 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 NDUFB10O96000 172 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 SKIP12755 728 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 TDO2P48775 406 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 PDE1AP54750 535 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 PDE4BQ07343 736 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 PPARAQ07869 468 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 LRRC26Q2I0M4 334 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 LRIT3Q3SXY7 679 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 FAM83BQ5T0W9 1011 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 DNAJC14Q6Y2X3 702 aaPredicted RBP7.12□□□□□ -1.27
FAM49B-228ENST00000523993 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 NCAPG2Q86XI2 1143 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 ZNF444Q8N0Y2 327 aaPredicted RBP7.12□□□□□ -1.27
FAM49B-228ENST00000523993 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 ARRDC4Q8NCT1 418 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 CEP95Q96GE4 821 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 GMCL1Q96IK5 515 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 SEC62Q99442 399 aaKnown RBP7.12□□□□□ -1.27
FAM49B-228ENST00000523993 TINF2Q9BSI4 451 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 ZBED2Q9BTP6 218 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 TEX13BQ9BXU2 312 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 SLC38A10Q9HBR0 1119 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 HELLSQ9NRZ9 838 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 FEM1BQ9UK73 627 aa7.12□□□□□ -1.27
FAM49B-228ENST00000523993 SYNGAP1Q96PV0 1343 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 ORC4O43929 436 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 SLC3A2P08195 630 aaKnown RBP7.11□□□□□ -1.27
FAM49B-228ENST00000523993 ZNF865P0CJ78 1059 aaPredicted RBP7.11□□□□□ -1.27
FAM49B-228ENST00000523993 SLC4A3P48751 1232 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 NT5C2P49902 561 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 NKX3-2P78367 333 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 PLS1Q14651 629 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 KCTD2Q14681 263 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 CRTC2Q53ET0 693 aaPredicted RBP7.11□□□□□ -1.27
FAM49B-228ENST00000523993 PLEKHM2Q8IWE5 1019 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 C7orf61Q8IZ16 206 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 MMP19Q99542 508 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 FSD1Q9BTV5 496 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 NAPBQ9H115 298 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 OSBPL3Q9H4L5 887 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 CLIP2Q9UDT6 1046 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 RIPK3Q9Y572 518 aa7.11□□□□□ -1.27
FAM49B-228ENST00000523993 PRUNE2Q8WUY3 3088 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 KIAA1217Q5T5P2 1943 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 RNF40O75150 1001 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 PRDM1O75626 825 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 APPP05067 770 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 TSPY3P0CV98 308 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 TSPY8P0CW00 308 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 PCP11498 1178 aaKnown RBP7.1□□□□□ -1.27
FAM49B-228ENST00000523993 CNGA1P29973 690 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 MAGEA10P43363 369 aaPredicted RBP7.1□□□□□ -1.27
FAM49B-228ENST00000523993 TFAP4Q01664 338 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 LRRC41Q15345 812 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 ANKRD45Q5TZF3 282 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 SLC39A5Q6ZMH5 540 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 TDHQ8IZJ6 230 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 CHST13Q8NET6 341 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 NUP88Q99567 741 aaPredicted RBP7.1□□□□□ -1.27
FAM49B-228ENST00000523993 SENP6Q9GZR1 1112 aaPredicted RBP7.1□□□□□ -1.27
FAM49B-228ENST00000523993 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 IGSF5Q9NSI5 407 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 TCP11L1Q9NUJ3 509 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 FBXO40Q9UH90 709 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
FAM49B-228ENST00000523993 ZNF536O15090 1300 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 VCANP13611 3396 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SOWAHDA6NJG2 315 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 KBTBD13C9JR72 458 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SOX1O00570 391 aaPredicted RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 ZBED4O75132 1171 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 ADAMTS4O75173 837 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SNAI1O95863 264 aaPredicted RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 FGAP02671 866 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 PGK2P07205 417 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 BMP3P12645 472 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 AKR1A1P14550 325 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SYN1P17600 705 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 CST5P28325 142 aaPredicted RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 STAT2P52630 851 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 MCMDC2Q4G0Z9 681 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 FAM47AQ5JRC9 791 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 PRAMEF19Q5SWL8 479 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 GJC2Q5T442 439 aaPredicted RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 VPS53Q5VIR6 699 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SLFN13Q68D06 897 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 DESI1Q6ICB0 168 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 SNRNP48Q6IEG0 339 aaKnown RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 CCSAPQ6IQ19 270 aaPredicted RBP7.09□□□□□ -1.27
FAM49B-228ENST00000523993 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 LYPD8Q6UX82 237 aa7.09□□□□□ -1.27
FAM49B-228ENST00000523993 BTNL9Q6UXG8 535 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms