RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 VWCEQ96DN2 955 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 LRFN3Q9BTN0 628 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 CHMP4BQ9H444 224 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 EPHX3Q9H6B9 360 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 EPB41L4AQ9HCS5 686 aaPredicted RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 VTA1Q9NP79 307 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 DDX19BQ9UMR2 479 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 CHD7Q9P2D1 2997 aa9.43□□□□□ -0.9
NSMCE2-213ENST00000523824 SPDYE4A6NLX3 237 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 RFC2P35250 354 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 SNAP25P60880 206 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 DUSP28Q4G0W2 176 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 MUM1L1Q5H9M0 696 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 TMEM31Q5JXX7 168 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 NSMFQ6X4W1 530 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 KCTD1Q719H9 257 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 PHOSPHO2Q8TCD6 241 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 HLA-CQ95604 372 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 SLC9A7Q96T83 725 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 WDR11Q9BZH6 1224 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 NACAP1Q9BZK3 213 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 FTOQ9C0B1 505 aaKnown RBP eCLIP9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 CYP39A1Q9NYL5 469 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 ADD3Q9UEY8 706 aaKnown RBP9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 TRANK1O15050 2925 aa9.42□□□□□ -0.9
NSMCE2-213ENST00000523824 MCM3APO60318 1980 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 TCF20Q9UGU0 1960 aaKnown RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 TLL1O43897 1013 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 PLA2G6O60733 806 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 CPT1AP50416 773 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 PURAQ00577 322 aaKnown RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 TAP1Q03518 808 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 LRRFIP1Q32MZ4 808 aaKnown RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 BRDTQ58F21 947 aaPredicted RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 KRT40Q6A162 431 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 OR6J1Q8NGC5 347 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 GPATCH3Q96I76 525 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 MTG1Q9BT17 334 aaPredicted RBP9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 CCPG1Q9ULG6 757 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 PRR12Q9ULL5 1215 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 STX8Q9UNK0 236 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
NSMCE2-213ENST00000523824 EPOPA6NHQ4 379 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 M0R2C6 588 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 IQCF3P0C7M6 154 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 BAATQ14032 418 aaPredicted RBP9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 HERC6Q8IVU3 1022 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 MORC4Q8TE76 937 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 NAPBQ9H115 298 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 NOD1Q9Y239 953 aa9.4□□□□□ -0.9
NSMCE2-213ENST00000523824 GBF1Q92538 1859 aa9.4□□□□□ -0.91
NSMCE2-213ENST00000523824 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 REV3LO60673 3130 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 RAD50Q92878 1312 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 LOC102724159A0A0B4J2E5 919 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 KPNA6O60684 536 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 ICAM1P05362 532 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 KCNJ6P48051 423 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 PPARAQ07869 468 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 GRB10Q13322 594 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 BFSP2Q13515 415 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 PWP2Q15269 919 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 NFRKBQ6P4R8 1299 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 PPP1R13LQ8WUF5 828 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 MPHOSPH6Q99547 160 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 PRRC2BQ5JSZ5 2229 aaKnown RBP9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 MYH4Q9Y623 1939 aa9.39□□□□□ -0.91
NSMCE2-213ENST00000523824 RBM47A0AV96 593 aaKnown RBP9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 FAM86C2PA6NEL3 165 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 NKRFO15226 690 aaKnown RBP eCLIP9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 GPR37L1O60883 481 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 BAIAP3O94812 1187 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 ARHGEF15O94989 841 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 CALML3P27482 149 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 PTPN11Q06124 597 aaPredicted RBP9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 PDE4DQ08499 809 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 TSHZ3Q63HK5 1081 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
NSMCE2-213ENST00000523824 CCDC155Q8N6L0 562 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms