RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
TNPO1-213ENST00000523768 SEC31AO94979 1220 aaKnown RBP12.66□□□□□ -0.38
TNPO1-213ENST00000523768 BRD3Q15059 726 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
TNPO1-213ENST00000523768 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 CNNM4Q6P4Q7 775 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 UBXN6Q9BZV1 441 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 STK17AQ9UEE5 414 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 C10orf71Q711Q0 1435 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 LRRC37AA6NMS7 1700 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 GRB10Q13322 594 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 WHAMMP3Q1A5X7 153 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
TNPO1-213ENST00000523768 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
TNPO1-213ENST00000523768 B4DLN1 442 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 EDIL3O43854 480 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
TNPO1-213ENST00000523768 CALCRLQ16602 461 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 FIGNQ5HY92 759 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 MSANTD4Q8NCY6 345 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
TNPO1-213ENST00000523768 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 PVALEFA0A1B0GWK0 134 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
TNPO1-213ENST00000523768 SASH3O75995 380 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 FCER1AP12319 257 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 TXKP42681 527 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 ADCY7P51828 1080 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 GTF2IP78347 998 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 AMPD2Q01433 879 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 TBC1D8BQ0IIM8 1120 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 PDIA5Q14554 519 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 KIAA0895Q8NCT3 520 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 HNRNPLLQ8WVV9 542 aaKnown RBP12.65□□□□□ -0.38
TNPO1-213ENST00000523768 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
TNPO1-213ENST00000523768 RAB21Q9UL25 225 aa12.65□□□□□ -0.38
TNPO1-213ENST00000523768 ZBED6P86452 979 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 MIIPQ5JXC2 388 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 UNC13DQ70J99 1090 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 ZNF771Q7L3S4 317 aaPredicted RBP12.64□□□□□ -0.39
TNPO1-213ENST00000523768 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 PKNOX2Q96KN3 472 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 ANKZF1Q9H8Y5 726 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
TNPO1-213ENST00000523768 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
TNPO1-213ENST00000523768 PSMD14O00487 310 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 AKR1B1P15121 316 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 KRT83P78385 493 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 DDR1Q08345 913 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 TMEM266Q2M3C6 531 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 COA7Q96BR5 231 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 FUT8Q9BYC5 575 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
TNPO1-213ENST00000523768 ZHX1Q9UKY1 873 aaPredicted RBP12.64□□□□□ -0.39
TNPO1-213ENST00000523768 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 MYMKA6NI61 221 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 SLC37A4O43826 429 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 TTLL1O95922 423 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 HERVK_113P62684 666 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 CDK17Q00537 523 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 CCDC170Q8IYT3 715 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 LARP4BQ92615 738 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 SEMA6BQ9H3T3 888 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 ABCB11O95342 1321 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 CYLC1P35663 651 aaPredicted RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 PICALMQ13492 652 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 NOC4LQ9BVI4 516 aaKnown RBP12.63□□□□□ -0.39
TNPO1-213ENST00000523768 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
TNPO1-213ENST00000523768 DDX4Q9NQI0 724 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms