RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263		A6NJR5	290 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	PRR33	A8MZF0	331 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	PATL2	C9JE40	543 aa	Known RBP	11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	PARN	O95453	639 aa	Known RBP	11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	TSPY3	P0CV98	308 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	TSPY8	P0CW00	308 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	ALAS1	P13196	640 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	SLC1A4	P43007	532 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	PDE4B	Q07343	736 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	BFSP2	Q13515	415 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	BRDT	Q58F21	947 aa	Predicted RBP	11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	TMEM63B	Q5T3F8	832 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	DEFB128	Q7Z7B8	93 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	PANK1	Q8TE04	598 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	ARNTL2	Q8WYA1	636 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	WDR11	Q9BZH6	1224 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	GPHN	Q9NQX3	736 aa	Predicted RBP	11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	DDX19B	Q9UMR2	479 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	BDP1	A6H8Y1	2624 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	MYH8	P13535	1937 aa		11.23	□□□□□ -0.61
VIRMA-208	ENST00000523263	RNF113A	O15541	343 aa	Known RBP	11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	GPAA1	O43292	621 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	PRDM1	O75626	825 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	ARHGEF15	O94989	841 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	ICAM1	P05362	532 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	PTGS1	P23219	599 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	NOV	P48745	357 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	TDO2	P48775	406 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	NBPF20	Q3BBV1	942 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	MUM1L1	Q5H9M0	696 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	KRT40	Q6A162	431 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	BTNL9	Q6UXG8	535 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	EEPD1	Q7L9B9	569 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	IFNL3	Q8IZI9	196 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	LRRCC1	Q9C099	1032 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	KCNH6	Q9H252	994 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	CERS4	Q9HA82	394 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	ECHDC1	Q9NTX5	307 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	PNMA2	Q9UL42	364 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	PRR12	Q9ULL5	1215 aa		11.22	□□□□□ -0.61
VIRMA-208	ENST00000523263	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	RAD50	Q92878	1312 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	SLC3A2	P08195	630 aa	Known RBP	11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	MCC	P23508	829 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	ALDH5A1	P51649	535 aa	Predicted RBP	11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	TFAP4	Q01664	338 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	RBL2	Q08999	1139 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	LEXM	Q3ZCV2	418 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	SESTD1	Q86VW0	696 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	STK11IP	Q8N1F8	1099 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	CAGE1	Q8TC20	777 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	AFAP1L1	Q8TED9	768 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	NACAP1	Q9BZK3	213 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	MAF1	Q9H063	256 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	RANBP17	Q9H2T7	1088 aa	Known RBP	11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	CD320	Q9NPF0	282 aa		11.21	□□□□□ -0.61
VIRMA-208	ENST00000523263	CXCL10	P02778	98 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	MYL3	P08590	195 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	EDNRB	P24530	442 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	KCNJ6	P48051	423 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	ERVK-21	P61565	698 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	IK	Q13123	557 aa	Predicted RBP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	BAAT	Q14032	418 aa	Predicted RBP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	PUS10	Q3MIT2	529 aa	Known RBP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	NSMF	Q6X4W1	530 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	FAM178B	Q8IXR5	827 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	CCDC155	Q8N6L0	562 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	OR6J1	Q8NGC5	347 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	SCFD2	Q8WU76	684 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	MPHOSPH6	Q99547	160 aa	Known RBP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	CCPG1	Q9ULG6	757 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	DDX49	Q9Y6V7	483 aa	Known RBP	11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	MYO9B	Q13459	2157 aa		11.2	□□□□□ -0.62
VIRMA-208	ENST00000523263	EFCAB14	O75071	495 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	APP	P05067	770 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	ALAD	P13716	330 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	WDR5	P61964	334 aa	Known RBP	11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	PPARA	Q07869	468 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	GPNMB	Q14956	572 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	FAM47C	Q5HY64	1035 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	KCTD1	Q719H9	257 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	GJD3	Q8N144	294 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	DNER	Q8NFT8	737 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	DCAF4	Q8WV16	495 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	PURB	Q96QR8	312 aa	Known RBP	11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	RAD9A	Q99638	391 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	UBE2Z	Q9H832	354 aa	Predicted RBP	11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	IL17RB	Q9NRM6	502 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	CHD7	Q9P2D1	2997 aa		11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.19	□□□□□ -0.62
VIRMA-208	ENST00000523263	TCF20	Q9UGU0	1960 aa	Known RBP	11.18	□□□□□ -0.62
VIRMA-208	ENST00000523263	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.18	□□□□□ -0.62
VIRMA-208	ENST00000523263		B4DLN1	442 aa		11.18	□□□□□ -0.62
VIRMA-208	ENST00000523263		M0R2C6	588 aa		11.18	□□□□□ -0.62
VIRMA-208	ENST00000523263	GJB5	O95377	273 aa		11.18	□□□□□ -0.62
VIRMA-208	ENST00000523263	SELP	P16109	830 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms