RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 GRM4Q14833 912 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 MAP3K11Q16584 847 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 APOBEC3HQ6NTF7 200 aaKnown RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 CDC42EP5Q6NZY7 148 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 NOSTRINQ8IVI9 506 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 DIS3L2Q8IYB7 885 aaKnown RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 LZTS2Q9BRK4 669 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 PANK2Q9BZ23 570 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 PDGFDQ9GZP0 370 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 OSBPL5Q9H0X9 879 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 RBSNQ9H1K0 784 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 DDX4Q9NQI0 724 aaKnown RBP7.89□□□□□ -1.15
CSMD1-211ENST00000523062 IL17RBQ9NRM6 502 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 DACT1Q9NYF0 836 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 CLIC4Q9Y696 253 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 MYH1P12882 1939 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 KIF13BQ9NQT8 1826 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 UBE2Q2LH0YL09 131 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 CTAGE5O15320 804 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 ADH1AP07327 375 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 CCDC192P0DO97 292 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 POLD1P28340 1107 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 PTGIRP43119 386 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 FAM160A1Q05DH4 1040 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 GABPAQ06546 454 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 SLC39A14Q15043 492 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 PKN1Q16512 942 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 RILPL1Q5EBL4 403 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 ADALQ6DHV7 355 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 CCAR1Q8IX12 1150 aaKnown RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 FAM177A1Q8N128 213 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 SRBD1Q8N5C6 995 aaKnown RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 FSIP1Q8NA03 581 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 MRPS27Q92552 414 aaKnown RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 TMEM47Q9BQJ4 181 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 IDI2Q9BXS1 227 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 EHD4Q9H223 541 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 VPS33BQ9H267 617 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 TNMDQ9H2S6 317 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 DHX36Q9H2U1 1008 aaKnown RBP7.88□□□□□ -1.15
CSMD1-211ENST00000523062 LIMD1Q9UGP4 676 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 SERPINB13Q9UIV8 391 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 PCDHA7Q9UN72 937 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 KCNJ14Q9UNX9 436 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 SCN9AQ15858 1988 aa7.88□□□□□ -1.15
CSMD1-211ENST00000523062 ZNF646O15015 1829 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 ADAMTSL1Q8N6G6 1762 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 BTBD18B2RXH4 712 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 KINO60870 393 aaKnown RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 PPP6R2O75170 966 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 TOP1P11387 765 aaKnown RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 SCG2P13521 617 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 KRT2P35908 639 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 NOVP48745 357 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 RBM5P52756 815 aaKnown RBP eCLIP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 TGFB2P61812 414 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 CCDC173Q0VFZ6 552 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 PFKFB3Q16875 520 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 RIPOR1Q6ZS17 1223 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 RBM43Q6ZSC3 357 aaKnown RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 LARGE2Q8N3Y3 721 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 GTPBP3Q969Y2 492 aaKnown RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 GOLPH3LQ9H4A5 285 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 SH3GLB2Q9NR46 395 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 VPS54Q9P1Q0 977 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 NOL7Q9UMY1 257 aaKnown RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 CEP131Q9UPN4 1083 aa7.87□□□□□ -1.15
CSMD1-211ENST00000523062 COL2A1P02458 1487 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-211ENST00000523062 MYH6P13533 1939 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 IGKV6D-41A0A0C4DH26 115 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 YDJCA8MPS7 323 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 CUTAO60888 179 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 LILRA1O75019 489 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 BMP15O95972 392 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 PARP1P09874 1014 aaKnown RBP7.86□□□□□ -1.15
CSMD1-211ENST00000523062 KCNA3P22001 575 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 CALML3P27482 149 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 NFIAQ12857 509 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 PTPAQ15257 358 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 UVSSAQ2YD98 709 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 NIM1KQ8IY84 436 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 ENGASEQ8NFI3 743 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 CCDC148Q8NFR7 591 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 CEP95Q96GE4 821 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms