RNA–Protein interactions for RNA: ENST00000523058.5

DENND3-219, Transcript of DENN domain containing 3, human

TSL 3

Gene DENND3, Length 906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-219	ENST00000523058	RPS6	P62753	249 aa	Known RBP	27.95	■■■□□ 2.06
DENND3-219	ENST00000523058	FAAP100	Q0VG06	881 aa		27.95	■■■□□ 2.06
DENND3-219	ENST00000523058	SLC30A10	Q6XR72	485 aa		27.95	■■■□□ 2.06
DENND3-219	ENST00000523058	ADGRF4	Q8IZF3	695 aa		27.95	■■■□□ 2.06
DENND3-219	ENST00000523058	PURB	Q96QR8	312 aa	Known RBP	27.95	■■■□□ 2.06
DENND3-219	ENST00000523058	ABCB11	O95342	1321 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	ARVCF	O00192	962 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	SGSM2	O43147	1006 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	CDK7	P50613	346 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	IRX5	P78411	483 aa	Predicted RBP	27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	USH1G	Q495M9	461 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	KIAA1211	Q6ZU35	1233 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	SEZ6L	Q9BYH1	1024 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	PDGFC	Q9NRA1	345 aa		27.94	■■■□□ 2.06
DENND3-219	ENST00000523058	DYNC1LI2	O43237	492 aa	Predicted RBP	27.93	■■■□□ 2.06
DENND3-219	ENST00000523058	CYP21A2	P08686	494 aa		27.93	■■■□□ 2.06
DENND3-219	ENST00000523058	SEC23A	Q15436	765 aa		27.93	■■■□□ 2.06
DENND3-219	ENST00000523058	FSCN1	Q16658	493 aa	Known RBP	27.93	■■■□□ 2.06
DENND3-219	ENST00000523058	CPVL	Q9H3G5	476 aa		27.93	■■■□□ 2.06
DENND3-219	ENST00000523058	BEX3	Q00994	111 aa		27.92	■■■□□ 2.06
DENND3-219	ENST00000523058	PTH1R	Q03431	593 aa		27.92	■■■□□ 2.06
DENND3-219	ENST00000523058	DUSP28	Q4G0W2	176 aa		27.92	■■■□□ 2.06
DENND3-219	ENST00000523058	DDX49	Q9Y6V7	483 aa	Known RBP	27.92	■■■□□ 2.06
DENND3-219	ENST00000523058	RBM47	A0AV96	593 aa	Known RBP	27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	ERICH2	A1L162	156 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	TLR3	O15455	904 aa	Known RBP	27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	DHX16	O60231	1041 aa	Known RBP	27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	EDNRB	P24530	442 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	PDE4D	Q08499	809 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	CYB5R4	Q7L1T6	521 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	RALYL	Q86SE5	291 aa	Known RBP	27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	MCF2L2	Q86YR7	1114 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	DEFB123	Q8N688	67 aa		27.91	■■■□□ 2.06
DENND3-219	ENST00000523058	ITGB8	P26012	769 aa		27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	SART3	Q15020	963 aa	Known RBP	27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	SHH	Q15465	462 aa		27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	FBXO11	Q86XK2	927 aa		27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	NCOA7	Q8NI08	942 aa		27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	WDR11	Q9BZH6	1224 aa		27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	MRPL11	Q9Y3B7	192 aa	Known RBP	27.9	■■■□□ 2.06
DENND3-219	ENST00000523058	NKRF	O15226	690 aa	Known RBP eCLIP	27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	FPGS	Q05932	587 aa		27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	QRICH1	Q2TAL8	776 aa		27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	CXCL17	Q6UXB2	119 aa		27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	JMJD4	Q9H9V9	463 aa		27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	TBX21	Q9UL17	535 aa		27.89	■■■□□ 2.06
DENND3-219	ENST00000523058	TIMP1	P01033	207 aa		27.88	■■■□□ 2.05
DENND3-219	ENST00000523058	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.88	■■■□□ 2.05
DENND3-219	ENST00000523058	FAM126B	Q8IXS8	530 aa		27.88	■■■□□ 2.05
DENND3-219	ENST00000523058	SLC43A3	Q8NBI5	491 aa		27.88	■■■□□ 2.05
DENND3-219	ENST00000523058	MAP4K1	Q92918	833 aa		27.88	■■■□□ 2.05
DENND3-219	ENST00000523058	KLRF2	D3W0D1	207 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058		E7EWF7	191 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	IFIT3	O14879	490 aa	Known RBP	27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	CPT1A	P50416	773 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	C9orf50	Q5SZB4	431 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	SCFD2	Q8WU76	684 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	VAT1L	Q9HCJ6	419 aa		27.87	■■■□□ 2.05
DENND3-219	ENST00000523058	ITGA7	Q13683	1181 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	PPP2R5B	Q15173	497 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	BRDT	Q58F21	947 aa	Predicted RBP	27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	STAG2	Q8N3U4	1231 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	AMN	Q9BXJ7	453 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	POLR3E	Q9NVU0	708 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	MAD2L2	Q9UI95	211 aa		27.86	■■■□□ 2.05
DENND3-219	ENST00000523058	TRAF1	Q13077	416 aa		27.85	■■■□□ 2.05
DENND3-219	ENST00000523058	WTAP	Q15007	396 aa		27.85	■■■□□ 2.05
DENND3-219	ENST00000523058	MFSD5	Q6N075	450 aa		27.85	■■■□□ 2.05
DENND3-219	ENST00000523058	NSUN6	Q8TEA1	469 aa	Known RBP	27.85	■■■□□ 2.05
DENND3-219	ENST00000523058	PALM3	A6NDB9	673 aa	Predicted RBP	27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	CD4	P01730	458 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	TMEM63B	Q5T3F8	832 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	SAMD3	Q8N6K7	520 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	OR6J1	Q8NGC5	347 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	MTMR8	Q96EF0	704 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	IWS1	Q96ST2	819 aa		27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	MAP3K20	Q9NYL2	800 aa	Known RBP	27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	RBM8A	Q9Y5S9	174 aa	Known RBP	27.84	■■■□□ 2.05
DENND3-219	ENST00000523058	ZBTB5	O15062	677 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058	PTGS1	P23219	599 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058	TTLL4	Q14679	1199 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058	GRM4	Q14833	912 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058		Q7L0L9	218 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058	MTMR10	Q9NXD2	777 aa		27.83	■■■□□ 2.05
DENND3-219	ENST00000523058	SMAD3	P84022	425 aa	Known RBP	27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	PPIG	Q13427	754 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	TMEM199	Q8N511	208 aa		27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	TBC1D5	Q92609	795 aa		27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	RNPC3	Q96LT9	517 aa	Known RBP	27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	RMDN3	Q96TC7	470 aa		27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	MTA3	Q9BTC8	594 aa		27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	GPHN	Q9NQX3	736 aa	Predicted RBP	27.82	■■■□□ 2.04
DENND3-219	ENST00000523058	KPNA6	O60684	536 aa		27.81	■■■□□ 2.04
DENND3-219	ENST00000523058	GHRHR	Q02643	423 aa		27.81	■■■□□ 2.04
DENND3-219	ENST00000523058	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.81	■■■□□ 2.04
DENND3-219	ENST00000523058	TAAR1	Q96RJ0	339 aa		27.81	■■■□□ 2.04
DENND3-219	ENST00000523058	KIAA1217	Q5T5P2	1943 aa		27.8	■■■□□ 2.04
DENND3-219	ENST00000523058	TXN	P10599	105 aa	Known RBP	27.8	■■■□□ 2.04
DENND3-219	ENST00000523058	EPHB4	P54760	987 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms