RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ANKRD40Q6AI12 368 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TMTC1Q8IUR5 882 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CHP1Q99653 195 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 BLOC1S4Q9NUP1 217 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 POTEMA6NI47 508 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NPR1P16066 1061 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 EEF1GP26641 437 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TRIM14Q14142 442 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SHROOM1Q2M3G4 852 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CSGALNACT2Q8N6G5 542 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 P2RX5Q93086 422 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DHTKD1Q96HY7 919 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 LRWD1Q9UFC0 647 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 B4DLN1 442 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TNNI2P48788 182 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CACNB3P54284 484 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MCM6Q14566 821 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CYP26C1Q6V0L0 522 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KIAA0895Q8NCT3 520 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CALML4Q96GE6 196 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SWAP70Q9UH65 585 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 FAM196BA6NMK8 535 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CCNE1P24864 410 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ORC2Q13416 577 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DNAJC18Q9H819 358 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MYMKA6NI61 221 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KIF5CO60282 957 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 14.1
RAB11FIP1-204ENST00000522774 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 GJA10Q969M2 543 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 FAM53CQ9NYF3 392 aa12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
RAB11FIP1-204ENST00000522774 A0A1W2PQC6 194 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KLK7P49862 253 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TEX35Q5T0J7 233 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CNOT6LQ96LI5 555 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TUBGCP2Q9BSJ2 902 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SLC39A2Q9NP94 309 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 REXO2Q9Y3B8 237 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MYO3BQ8WXR4 1341 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 RASSF10A6NK89 507 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CRKP46108 304 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SV2BQ7L1I2 683 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DYMQ7RTS9 669 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KCNK18Q7Z418 384 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NLGN1Q8N2Q7 840 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SEMA6BQ9H3T3 888 aa12.04□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MYH7BA7E2Y1 1941 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 G3V3G9 751 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MMP10P09238 476 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 AMPD3Q01432 767 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TCP10Q12799 353 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 WDR59Q6PJI9 974 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 HLA-DOAP06340 250 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ECM1Q16610 540 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 UIMC1Q96RL1 719 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DNAJC7Q99615 494 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CAPN11Q9UMQ6 739 aa12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
RAB11FIP1-204ENST00000522774 BICDL2A1A5D9 508 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ALDH1B1P30837 517 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DNM2P50570 870 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TMEM266Q2M3C6 531 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MIIPQ5JXC2 388 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MSL1Q68DK7 614 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms