RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 ZNF804AQ7Z570 1209 aa6.33□□□□□ -1.4
CTNNA1-232ENST00000522013 MYD88Q99836 296 aa6.33□□□□□ -1.4
CTNNA1-232ENST00000522013 ZCCHC2Q9C0B9 1178 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-232ENST00000522013 GREM2Q9H772 168 aa6.33□□□□□ -1.4
CTNNA1-232ENST00000522013 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 SNAP23O00161 211 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 PCCAP05165 728 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 THBS1P07996 1170 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 HMGB1P09429 215 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 USP17L7P0C7H9 530 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 ZKSCAN1P17029 563 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 CCND3P30281 292 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 CRKP46108 304 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 MFSD14BQ5SR56 506 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 FASTKD5Q7L8L6 764 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 UBXN4Q92575 508 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 MPHOSPH8Q99549 860 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 ANKRD2Q9GZV1 360 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 NEUROD4Q9HD90 331 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 DNMT3LQ9UJW3 386 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 A0A0G2JMZ2 1700 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 BRWD1Q9NSI6 2320 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 ZNF318Q5VUA4 2279 aa6.32□□□□□ -1.4
CTNNA1-232ENST00000522013 LOC285556D6RIA3 1793 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 FAM187AA6NFU0 413 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 PRR33A8MZF0 331 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 CYP2E1P05181 493 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 FKBP1AP62942 108 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 CHRNDQ07001 517 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 CACNB2Q08289 660 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 GALNT12Q8IXK2 581 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 FBXL18Q96ME1 805 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 BCO2Q9BYV7 579 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 SRA1Q9HD15 236 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 BRD7Q9NPI1 651 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 LATS2Q9NRM7 1088 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 CWC25Q9NXE8 425 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 HCN2Q9UL51 889 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 SPTBN4Q9H254 2564 aa6.31□□□□□ -1.4
CTNNA1-232ENST00000522013 A0A0G2JLL6 359 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 CXCL11O14625 94 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 TAF5LO75529 589 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 AVPP01185 164 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 IL1R1P14778 569 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 CNGA1P29973 690 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 TRIM28Q13263 835 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 ADGRE1Q14246 886 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 GRM2Q14416 872 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 TRIM60Q495X7 471 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 MAP3K21Q5TCX8 1036 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 PRRT2Q7Z6L0 340 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 TTLL11Q8NHH1 800 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 ABI2Q9NYB9 513 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 KANSL3Q9P2N6 904 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 ZHX2Q9Y6X8 837 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 C5orf42Q9H799 3197 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 SMCHD1A6NHR9 2005 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 RPAP1Q9BWH6 1393 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 CHD7Q9P2D1 2997 aa6.3□□□□□ -1.4
CTNNA1-232ENST00000522013 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 TRIM75PA6NK02 468 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 GRXCR1A8MXD5 290 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 GADD45BO75293 160 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 EPB42P16452 691 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 EPHB4P54760 987 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 NFE2L2Q16236 605 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 CCDC191Q8NCU4 936 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 PBX4Q9BYU1 374 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 COPRSQ9NQ92 184 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 DBF4Q9UBU7 674 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 GJD2Q9UKL4 321 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 DYRK1BQ9Y463 629 aa6.29□□□□□ -1.4
CTNNA1-232ENST00000522013 MAPK8IP3Q9UPT6 1336 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 USP34Q70CQ2 3546 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 KBTBD13C9JR72 458 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 DNM1LO00429 736 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 GIPC1O14908 333 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 PLIN1O60240 522 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 SASH3O75995 380 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms