RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MAF1Q9H063 256 aa27.73■■■□□ 2.03
PVT1-212ENST00000521951 H3BQV1 296 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 STRNO43815 780 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 FCER1AP12319 257 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 CTGFP29279 349 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 HSD17B4P51659 736 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 BAATQ14032 418 aaPredicted RBP27.72■■■□□ 2.03
PVT1-212ENST00000521951 UBE2SQ16763 222 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 IFFO2Q5TF58 517 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 BLIDQ8IZY5 108 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 SAMD3Q8N6K7 520 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 DAGLBQ8NCG7 672 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 CYP39A1Q9NYL5 469 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 PIK3CDO00329 1044 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 PTPREP23469 700 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 HOXA13P31271 388 aaPredicted RBP27.72■■■□□ 2.03
PVT1-212ENST00000521951 RPS6P62753 249 aaKnown RBP27.72■■■□□ 2.03
PVT1-212ENST00000521951 KCTD2Q14681 263 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 BICD2Q8TD16 824 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 ARHGAP39Q9C0H5 1083 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 MAP3K20Q9NYL2 800 aaKnown RBP27.72■■■□□ 2.03
PVT1-212ENST00000521951 IVNS1ABPQ9Y6Y0 642 aa27.72■■■□□ 2.03
PVT1-212ENST00000521951 ZSWIM8A7E2V4 1837 aa27.71■■■□□ 2.03
PVT1-212ENST00000521951 PFASO15067 1338 aa27.71■■■□□ 2.03
PVT1-212ENST00000521951 PSMC4P43686 418 aa27.71■■■□□ 2.03
PVT1-212ENST00000521951 SLC30A10Q6XR72 485 aa27.71■■■□□ 2.03
PVT1-212ENST00000521951 OXER1Q8TDS5 423 aa27.71■■■□□ 2.03
PVT1-212ENST00000521951 BIN2Q9UBW5 565 aaPredicted RBP27.71■■■□□ 2.03
PVT1-212ENST00000521951 FKTNO75072 461 aa27.7■■■□□ 2.02
PVT1-212ENST00000521951 CLK2P49760 499 aaKnown RBP27.7■■■□□ 2.02
PVT1-212ENST00000521951 KIF22Q14807 665 aa27.7■■■□□ 2.02
PVT1-212ENST00000521951 TEX2Q8IWB9 1127 aa27.7■■■□□ 2.02
PVT1-212ENST00000521951 DIS3L2Q8IYB7 885 aaKnown RBP27.7■■■□□ 2.02
PVT1-212ENST00000521951 ABRAQ8N0Z2 381 aa27.7■■■□□ 2.02
PVT1-212ENST00000521951 SYTL5Q8TDW5 730 aaPredicted RBP27.7■■■□□ 2.02
PVT1-212ENST00000521951 ZNF296Q8WUU4 475 aaPredicted RBP27.7■■■□□ 2.02
PVT1-212ENST00000521951 VPS37CA5D8V6 355 aaPredicted RBP27.69■■■□□ 2.02
PVT1-212ENST00000521951 M0R2N6 131 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 TNPO2O14787 897 aaKnown RBP27.69■■■□□ 2.02
PVT1-212ENST00000521951 STX6O43752 255 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 KRT2P35908 639 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 FCGRTP55899 365 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 CAP1Q01518 475 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 SAFBQ15424 915 aaKnown RBP eCLIP27.69■■■□□ 2.02
PVT1-212ENST00000521951 REXO1Q8N1G1 1221 aaKnown RBP27.69■■■□□ 2.02
PVT1-212ENST00000521951 RASGRP4Q8TDF6 673 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 TRIM47Q96LD4 638 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 BRMS1Q9HCU9 246 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 TMEM260Q9NX78 707 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 COL20A1Q9P218 1284 aa27.69■■■□□ 2.02
PVT1-212ENST00000521951 SLC15A5A6NIM6 579 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 BTBD18B2RXH4 712 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 GRB14Q14449 540 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 JAKMIP3Q5VZ66 844 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 FCHSD1Q86WN1 690 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 CD99L2Q8TCZ2 262 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 PCDHA6Q9UN73 950 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 MTMR6Q9Y217 621 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 PCDHA8Q9Y5H6 950 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 LCTP09848 1927 aa27.68■■■□□ 2.02
PVT1-212ENST00000521951 PGK2P07205 417 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 ADORA2AP29274 412 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 MORN1Q5T089 497 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 PURBQ96QR8 312 aaKnown RBP27.67■■■□□ 2.02
PVT1-212ENST00000521951 DNAJC25-GNG10A0A024R161 153 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 DDIT3P35638 169 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 NR5A1Q13285 461 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 ERO1AQ96HE7 468 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 TAAR1Q96RJ0 339 aa27.67■■■□□ 2.02
PVT1-212ENST00000521951 POTEB2H3BUK9 544 aa27.66■■■□□ 2.02
PVT1-212ENST00000521951 PDIA4P13667 645 aaKnown RBP27.66■■■□□ 2.02
PVT1-212ENST00000521951 CNTN2Q02246 1040 aa27.66■■■□□ 2.02
PVT1-212ENST00000521951 MCTP1Q6DN14 999 aa27.66■■■□□ 2.02
PVT1-212ENST00000521951 FAM133AQ8N9E0 248 aa27.66■■■□□ 2.02
PVT1-212ENST00000521951 GJD2Q9UKL4 321 aa27.66■■■□□ 2.02
PVT1-212ENST00000521951 ZNF236Q9UL36 1845 aa27.65■■■□□ 2.02
PVT1-212ENST00000521951 COBLO75128 1261 aa27.65■■■□□ 2.02
PVT1-212ENST00000521951 FOSP01100 380 aaPredicted RBP27.65■■■□□ 2.02
PVT1-212ENST00000521951 PKP1Q13835 747 aa27.65■■■□□ 2.02
PVT1-212ENST00000521951 TNFRSF25Q93038 417 aa27.65■■■□□ 2.02
PVT1-212ENST00000521951 PGBD1Q96JS3 809 aa27.65■■■□□ 2.02
PVT1-212ENST00000521951 FOXP1Q9H334 677 aaPredicted RBP27.65■■■□□ 2.02
PVT1-212ENST00000521951 SPDYE3A6NKU9 549 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 KIF28PB7ZC32 967 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 AP3B2Q13367 1082 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 MCTP2Q6DN12 878 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 USP6NLQ92738 828 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 NUDT12Q9BQG2 462 aa27.64■■■□□ 2.02
PVT1-212ENST00000521951 PLXNA1Q9UIW2 1896 aa27.64■■■□□ 2.01
PVT1-212ENST00000521951 FOXN1O15353 648 aa27.63■■■□□ 2.01
PVT1-212ENST00000521951 U2AF2P26368 475 aaKnown RBP eCLIP27.63■■■□□ 2.018e-8■■■□□ 14.9
PVT1-212ENST00000521951 MAP2K5Q13163 448 aa27.63■■■□□ 2.01
PVT1-212ENST00000521951 GNL2Q13823 731 aaKnown RBP27.63■■■□□ 2.01
PVT1-212ENST00000521951 DPP9Q86TI2 863 aa27.63■■■□□ 2.01
PVT1-212ENST00000521951 SOWAHBA6NEL2 793 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 HSPA1AP0DMV8 641 aaKnown RBP27.62■■■□□ 2.01
PVT1-212ENST00000521951 HSPA1BP0DMV9 641 aaKnown RBP27.62■■■□□ 2.01
PVT1-212ENST00000521951 ZNF792Q3KQV3 632 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 EARS2Q5JPH6 523 aaKnown RBP27.62■■■□□ 2.01
PVT1-212ENST00000521951 KRT25Q7Z3Z0 450 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms