RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MVKQ03426 396 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 PAQR3Q6TCH7 311 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 CABP7Q86V35 215 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 C1QL4Q86Z23 238 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 SIGLEC10Q96LC7 697 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 GCM1Q9NP62 436 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 KLHL14Q9P2G3 628 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 MBD1Q9UIS9 605 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-209ENST00000521559 AKT3Q9Y243 479 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 GAPVD1Q14C86 1478 aa5.04□□□□□ -1.6
VPS13B-209ENST00000521559 TARBP1Q13395 1621 aaKnown RBP5.04□□□□□ -1.6
VPS13B-209ENST00000521559 GRIN2BQ13224 1484 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 NUDT19A8MXV4 375 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 SRGAP3O43295 1099 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 VAMP4O75379 141 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 CYBBP04839 570 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 SDHBP21912 280 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 MAPKAPK2P49137 400 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 CEBPAP49715 358 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-209ENST00000521559 ARID5AQ03989 594 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 BICRALQ6AI39 1079 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 ZC3H14Q6PJT7 736 aaKnown RBP5.03□□□□□ -1.6
VPS13B-209ENST00000521559 SPOCD1Q6ZMY3 1216 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 TMC6Q7Z403 805 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 FAM169BQ8N8A8 192 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 BVESQ8NE79 360 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.03□□□□□ -1.62e-6■■□□□ 12.4
VPS13B-209ENST00000521559 SGPP1Q9BX95 441 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 ACTR10Q9NZ32 417 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
VPS13B-209ENST00000521559 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-209ENST00000521559 STXBP3O00186 592 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 PFKLP17858 780 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 PAMP19021 973 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 KIR3DS1Q14943 382 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 FXNQ16595 210 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 DPY19L1Q2PZI1 675 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 TCERG1LQ5VWI1 586 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 MZB1Q8WU39 189 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 IRF2BPLQ9H1B7 796 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 CNTD2Q9H8S5 307 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 PRKAG3Q9UGI9 489 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 SUSD2Q9UGT4 822 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 DBR1Q9UK59 544 aaKnown RBP5.02□□□□□ -1.61
VPS13B-209ENST00000521559 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
VPS13B-209ENST00000521559 R3HCC1Q9Y3T6 440 aaKnown RBP5.02□□□□□ -1.61
VPS13B-209ENST00000521559 NPHP3-ACAD11A0A0J9YXS1 232 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 SMAD7O15105 426 aaKnown RBP5.01□□□□□ -1.61
VPS13B-209ENST00000521559 NPHS1O60500 1241 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 RBM25P49756 843 aaKnown RBP5.01□□□□□ -1.61
VPS13B-209ENST00000521559 TARBP2Q15633 366 aaKnown RBP5.01□□□□□ -1.61
VPS13B-209ENST00000521559 RPTNQ6XPR3 784 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 LCNL1Q6ZST4 164 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 LDHDQ86WU2 507 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 PPP1R14AQ96A00 147 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 NUDT5Q9UKK9 219 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 MRVI1Q9Y6F6 885 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 RUSC2Q8N2Y8 1516 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 CARMIL1Q5VZK9 1371 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 WDR97A6NE52 1622 aa5.01□□□□□ -1.61
VPS13B-209ENST00000521559 FHAD1B1AJZ9 1412 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 KCNH1O95259 989 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 DBHP09172 617 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 CDR1P51861 262 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 LARP1BQ659C4 914 aaKnown RBP5□□□□□ -1.61
VPS13B-209ENST00000521559 IQCEQ6IPM2 695 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 FAM178BQ8IXR5 827 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 FAM9AQ8IZU1 332 aaPredicted RBP5□□□□□ -1.61
VPS13B-209ENST00000521559 LZTR1Q8N653 840 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 SLC43A3Q8NBI5 491 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 CYP26B1Q9NR63 512 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 LRP2BPQ9P2M1 347 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 SNAPC4Q5SXM2 1469 aa5□□□□□ -1.61
VPS13B-209ENST00000521559 MAGI1Q96QZ7 1491 aaPredicted RBP5□□□□□ -1.61
VPS13B-209ENST00000521559 EEA1Q15075 1411 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 E9PSI1 815 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 F8W031 263 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 IRS4O14654 1257 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 DDAH1O94760 285 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 MSL3P1P0C860 447 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 PI3P19957 117 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 EPHB3P54753 998 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 PLEKHN1Q494U1 663 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 SV2CQ496J9 727 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 TRIM59Q8IWR1 403 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 NETO2Q8NC67 525 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 PEX11GQ96HA9 241 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 MMP19Q99542 508 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 MCMBPQ9BTE3 642 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 APEX2Q9UBZ4 518 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 RAPGEFL1Q9UHV5 662 aa4.99□□□□□ -1.61
VPS13B-209ENST00000521559 EIF4G3O43432 1585 aaKnown RBP4.99□□□□□ -1.61
VPS13B-209ENST00000521559 ABCA5Q8WWZ7 1642 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms