RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 PPP2R2CQ9Y2T4 447 aa5.69□□□□□ -1.5
NPM1-207ENST00000521260 MYPNQ86TC9 1320 aa5.69□□□□□ -1.5
NPM1-207ENST00000521260 CDK13Q14004 1512 aaKnown RBP5.69□□□□□ -1.5
NPM1-207ENST00000521260 LAMC3Q9Y6N6 1575 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SENP3-EIF4A1A0A087X0R7 540 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 ST20-MTHFSA0A0A6YYL1 179 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 HTR3EA5X5Y0 456 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 TTC34A8MYJ7 566 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 EIF3FO00303 357 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 CYP27B1O15528 508 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SART1O43290 800 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 CBFA2T3O75081 653 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 MAP4K4O95819 1239 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 HSPA8P11142 646 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 PORP16435 677 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ATP6V1C1P21283 382 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 CALB2P22676 271 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 PCK1P35558 622 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 ZNF131P52739 623 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 PPIDQ08752 370 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 DMPKQ09013 629 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 CYLC2Q14093 348 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ZNF268Q14587 947 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 KPNB1Q14974 876 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 PPP1R7Q15435 360 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 GSTA3Q16772 222 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 TRIM71Q2Q1W2 868 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ANKRD20A8PQ5CZ79 823 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 VARS2Q5ST30 1063 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ZMYM1Q5SVZ6 1142 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 EMBQ6PCB8 327 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 C6orf89Q6UWU4 347 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 ANKRD13DQ6ZTN6 518 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 NLRP14Q86W24 1093 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 PASD1Q8IV76 773 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 ZNF687Q8N1G0 1237 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 GABPB2Q8TAK5 448 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 KLHDC4Q8TBB5 520 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 PIP4K2CQ8TBX8 421 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SNF8Q96H20 258 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 CLMNQ96JQ2 1002 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 TUBGCP5Q96RT8 1024 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 USB1Q9BQ65 265 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 SENP7Q9BQF6 1050 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 NUP58Q9BVL2 599 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SEZ6LQ9BYH1 1024 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 TANGO6Q9C0B7 1094 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 NSRP1Q9H0G5 558 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 DHX36Q9H2U1 1008 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 TIMMDC1Q9NPL8 285 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SLAIN2Q9P270 581 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 CHIC2Q9UKJ5 165 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 GTF3C4Q9UKN8 822 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 MKL2Q9ULH7 1088 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 TTF2Q9UNY4 1162 aaKnown RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ZNF652Q9Y2D9 606 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 AXIN2Q9Y2T1 843 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 SLC30A1Q9Y6M5 507 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 DENND4BO75064 1496 aaPredicted RBP5.68□□□□□ -1.5
NPM1-207ENST00000521260 ASXL1Q8IXJ9 1541 aa5.68□□□□□ -1.5
NPM1-207ENST00000521260 IQGAP2Q13576 1575 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 NUP160Q12769 1436 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 FANCAO15360 1455 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 IQANK1A0A1B0GTG1 560 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 ANKRD62A6NC57 917 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 MAGEA13PA6NCF6 341 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 GMNCA6NCL1 334 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 LRRC10BA6NIK2 292 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 FAM196BA6NMK8 535 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 E9PMD0 336 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 MATN2O00339 956 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 IKBKBO14920 756 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 CETN3O15182 167 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 PFKFB2O60825 505 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 N4BP1O75113 896 aaKnown RBP5.67□□□□□ -1.5
NPM1-207ENST00000521260 LSP1P33241 339 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 HSPA9P38646 679 aaKnown RBP5.67□□□□□ -1.5
NPM1-207ENST00000521260 SCTRP47872 440 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 APLP1P51693 650 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 GUCY2FP51841 1108 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 EPHB4P54760 987 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 INHBCP55103 352 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 BASP1P80723 227 aaKnown RBP5.67□□□□□ -1.5
NPM1-207ENST00000521260 DR1Q01658 176 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 ITIH4Q14624 930 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 FXNQ16595 210 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 PTGISQ16647 500 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 PTPRNQ16849 979 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 SKIDA1Q1XH10 827 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 HSP90AA5PQ58FG0 334 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 RC3H1Q5TC82 1133 aaKnown RBP5.67□□□□□ -1.5
NPM1-207ENST00000521260 TMEM164Q5U3C3 297 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 RASIP1Q5U651 963 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 GALNT17Q6IS24 598 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
NPM1-207ENST00000521260 C3orf62Q6ZUJ4 267 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 PPP1R42Q7Z4L9 355 aa5.67□□□□□ -1.5
NPM1-207ENST00000521260 SAPCD2Q86UD0 394 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms