RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 FKBP1CQ5VVH2 108 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 RASSF8Q8NHQ8 419 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 CUL5Q93034 780 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 KBTBD4Q9NVX7 518 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 STK17AQ9UEE5 414 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 HERC5Q9UII4 1024 aaKnown RBP11.21□□□□□ -0.61
SPARC-202ENST00000520687 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
SPARC-202ENST00000520687 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.62
SPARC-202ENST00000520687 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 H7C1D1 291 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 MPHOSPH10O00566 681 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 CCNT1O60563 726 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPARC-202ENST00000520687 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPARC-202ENST00000520687 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 NR1I3Q14994 352 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 PTPN14Q15678 1187 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 COBLL1Q53SF7 1204 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 CABP7Q86V35 215 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 KIAA0825Q8IV33 1275 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 ADGRF4Q8IZF3 695 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 RASGRP4Q8TDF6 673 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 UBA5Q9GZZ9 404 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 TNNT1P13805 278 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 USP11P51784 963 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 NFIAQ12857 509 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 PAK1Q13153 545 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 MOXD1Q6UVY6 613 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 IGSF22Q8N9C0 903 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 CCDC51Q96ER9 411 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 HHIPL1Q96JK4 782 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 MTMR9Q96QG7 549 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 MXD3Q9BW11 206 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 NAA15Q9BXJ9 866 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
SPARC-202ENST00000520687 LIMA1Q9UHB6 759 aaKnown RBP11.2□□□□□ -0.62
SPARC-202ENST00000520687 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 ARHGAP6O43182 974 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 STX10O60499 249 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 RHOBTB3O94955 611 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 FOSP01100 380 aaPredicted RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 TPM1P09493 284 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 AP3B2Q13367 1082 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 TRIM14Q14142 442 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 SEPT2Q15019 361 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 SYCP1Q15431 976 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 CALCRLQ16602 461 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 ABCB5Q2M3G0 1257 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 FOXR2Q6PJQ5 311 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 PANX2Q96RD6 677 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 PSTPIP2Q9H939 334 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.19□□□□□ -0.62
SPARC-202ENST00000520687 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
SPARC-202ENST00000520687 ITIH6Q6UXX5 1313 aa11.19□□□□□ -0.62
SPARC-202ENST00000520687 PVALEFA0A1B0GWK0 134 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 PSMA7O14818 248 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
SPARC-202ENST00000520687 EEF2P13639 858 aaKnown RBP11.18□□□□□ -0.62
SPARC-202ENST00000520687 SLC1A4P43007 532 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 AOC3Q16853 763 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 RSBN1LQ6PCB5 846 aaPredicted RBP11.18□□□□□ -0.62
SPARC-202ENST00000520687 BTNL9Q6UXG8 535 aa11.18□□□□□ -0.62
SPARC-202ENST00000520687 PPFIBP1Q86W92 1011 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms