RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
PABPC1-214ENST00000520142 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
PABPC1-214ENST00000520142 ALPK3Q96L96 1907 aa12.91□□□□□ -0.34
PABPC1-214ENST00000520142 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CTAGE5O15320 804 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CALM1P0DP23 149 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CALM2P0DP24 149 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CALM3P0DP25 149 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CPA1P15085 419 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 RXRAP19793 462 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 KIF5BP33176 963 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 HSD17B4P51659 736 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 FUT2Q10981 343 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 LRRC41Q15345 812 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CCSAPQ6IQ19 270 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 KLHDC9Q8NEP7 349 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 DNERQ8NFT8 737 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 LENG1Q96BZ8 264 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 LZTS2Q9BRK4 669 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 FAM184BQ9ULE4 1060 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.34
PABPC1-214ENST00000520142 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
PABPC1-214ENST00000520142 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 RARBP10826 455 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 CALML3P27482 149 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 GNAQP50148 359 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 RCAN1P53805 252 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 EVCP57679 992 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 GJC2Q5T442 439 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 TMTC3Q6ZXV5 915 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 XPNPEP3Q9NQH7 507 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 PDGFCQ9NRA1 345 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
PABPC1-214ENST00000520142 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-214ENST00000520142 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 MYH6P13533 1939 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-214ENST00000520142 PGK1P00558 417 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-214ENST00000520142 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 GJA9P57773 515 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 HOMER1Q86YM7 354 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
PABPC1-214ENST00000520142 TAAR1Q96RJ0 339 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 PHF24Q9UPV7 400 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 NID2Q14112 1375 aa12.88□□□□□ -0.35
PABPC1-214ENST00000520142 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
PABPC1-214ENST00000520142 DNAH12Q6ZR08 3092 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 SMPD1P17405 629 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-214ENST00000520142 TRAF1Q13077 416 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 SNX17Q15036 470 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 LRRC26Q2I0M4 334 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 IQSEC1Q6DN90 963 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 Q6ZUG5 572 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 FBXO16Q8IX29 292 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-214ENST00000520142 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
PABPC1-214ENST00000520142 Q9Y3F1 56 aa12.87□□□□□ -0.35
PABPC1-214ENST00000520142 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 H0YGN5 161 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 ZBTB43O43298 467 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 SEC24BO95487 1268 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 PTGS1P23219 599 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 PSMA5P28066 241 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 CDC27P30260 824 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 RUFY3Q7L099 469 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 RNF180Q86T96 592 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms