RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HSP90AB2PQ58FF8 381 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 RTP2Q5QGT7 225 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 LBX2Q6XYB7 198 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 SPACA3Q8IXA5 215 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 WDR66Q8TBY9 1149 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 TP53INP1Q96A56 240 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 WNK4Q96J92 1243 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 TTC1Q99614 292 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 DBNDD2Q9BQY9 259 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 ALG1Q9BT22 464 aa7.26□□□□□ -1.25
HMGB1P46-201ENST00000520062 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 ARNTLO00327 626 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 WNT9AO14904 365 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 GSC2O15499 205 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 FGF10O15520 208 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 F13BP05160 661 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 CEACAM5P06731 702 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 SYPP08247 313 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 GSTM1P09488 218 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 BPIP17213 487 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 PAMP19021 973 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 GATA4P43694 442 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 NFIAQ12857 509 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 PAK1Q13153 545 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 KIZQ2M2Z5 673 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 PIK3R6Q5UE93 754 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 TMPRSS7Q7RTY8 843 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 SPATS2Q86XZ4 545 aaKnown RBP7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 CCDC103Q8IW40 242 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 FBXL6Q8N531 539 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 USP7Q93009 1102 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 DCAF5Q96JK2 942 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 IFT22Q9H7X7 185 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 CLEC1BQ9P126 229 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 SAMD15Q9P1V8 674 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 TMEFF2Q9UIK5 374 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 TCFL5Q9UL49 500 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 G3BP2Q9UN86 482 aaKnown RBP7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 APOBEC2Q9Y235 224 aaKnown RBP7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 PCDHA8Q9Y5H6 950 aa7.25□□□□□ -1.25
HMGB1P46-201ENST00000520062 SSU72P8A0A1W2PR75 194 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 TPP2P29144 1249 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 SCNN1BP51168 640 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 FAM50AQ14320 339 aaKnown RBP7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 STAT4Q14765 748 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 ABHD17CQ6PCB6 329 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 CYP2R1Q6VVX0 501 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 ZC3H7AQ8IWR0 971 aaKnown RBP7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 SHISA5Q8N114 240 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 PTCHD1Q96NR3 888 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 CELF4Q9BZC1 486 aaKnown RBP7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 SNX11Q9Y5W9 270 aa7.24□□□□□ -1.25
HMGB1P46-201ENST00000520062 NPHP3-ACAD11A0A0J9YXS1 232 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 CBX4O00257 560 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 EPHB1P54762 984 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 RCBTB1Q8NDN9 531 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 PCDH19Q8TAB3 1148 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 PANK1Q8TE04 598 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 OSBPL1AQ9BXW6 950 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 PUS7LQ9H0K6 701 aaKnown RBP7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 SLC5A4Q9NY91 659 aa7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
HMGB1P46-201ENST00000520062 GSTA4O15217 222 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 MYO1BO43795 1136 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 MSCO60682 206 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 ALDH1L1O75891 902 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 GLRX3O76003 335 aaKnown RBP7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 F2P00734 622 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 IFI16Q16666 785 aaKnown RBP7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 IGSF22Q8N9C0 903 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 UBE2FQ969M7 185 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 FOXP3Q9BZS1 431 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 CABP5Q9NP86 173 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 SEMA3GQ9NS98 782 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 ZSWIM5Q9P217 1185 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 TCEAL9Q9UHQ7 104 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 DUSP13Q9UII6 198 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 EID1Q9Y6B2 187 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 U3KQE9 123 aa7.22□□□□□ -1.25
HMGB1P46-201ENST00000520062 H3BS24 57 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 NEMP1O14524 444 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 TBC1D8O95759 1140 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 CKMP06732 381 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 GTF2A2P52657 109 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 DSG1Q02413 1049 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 SLC51AQ86UW1 340 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 FAM181AQ8N9Y4 354 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 CDADC1Q9BWV3 514 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 ASPSCR1Q9BZE9 553 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 PLAGL2Q9UPG8 496 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms