RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
SPIDR-212ENST00000519661 NTRK3Q16288 839 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 Q6ZUG5 572 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 SYTL5Q8TDW5 730 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-212ENST00000519661 BRF1Q92994 677 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-212ENST00000519661 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
SPIDR-212ENST00000519661 CNPY2Q9Y2B0 182 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
SPIDR-212ENST00000519661 TNRC18O15417 2968 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 CPA1P15085 419 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 ALDH5A1P51649 535 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 RTN1Q16799 776 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 SLC30A10Q6XR72 485 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
SPIDR-212ENST00000519661 IWS1Q96ST2 819 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
SPIDR-212ENST00000519661 AKR1A1P14550 325 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 IFNAR1P17181 557 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 TAL1P17542 331 aaPredicted RBP13.34□□□□□ -0.27
SPIDR-212ENST00000519661 CDC27P30260 824 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 NSMFQ6X4W1 530 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 UPF3AQ9H1J1 476 aaKnown RBP13.34□□□□□ -0.27
SPIDR-212ENST00000519661 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 Q9Y3F1 56 aa13.34□□□□□ -0.27
SPIDR-212ENST00000519661 B4DLN1 442 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 DNM1LO00429 736 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 ADAMTS4O75173 837 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 DUSP11O75319 330 aaKnown RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 RXRAP19793 462 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 MLLT1Q03111 559 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 USH1GQ495M9 461 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 CCSAPQ6IQ19 270 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 NSUN6Q8TEA1 469 aaKnown RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 KIF2CQ99661 725 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 VAT1LQ9HCJ6 419 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 GNEQ9Y223 722 aaKnown RBP13.33□□□□□ -0.28
SPIDR-212ENST00000519661 FRMPD3Q5JV73 1810 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 PDE4DIPQ5VU43 2346 aa13.33□□□□□ -0.28
SPIDR-212ENST00000519661 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 MEIS2O14770 477 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
SPIDR-212ENST00000519661 FARP2O94887 1054 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-212ENST00000519661 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 IQSEC1Q6DN90 963 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
SPIDR-212ENST00000519661 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
SPIDR-212ENST00000519661 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
SPIDR-212ENST00000519661 FAM184BQ9ULE4 1060 aa13.32□□□□□ -0.28
SPIDR-212ENST00000519661 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 CTAGE5O15320 804 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 ADCY6O43306 1168 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 ADD1P35611 737 aaKnown RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 GJA9P57773 515 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 SNX17Q15036 470 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PRAMEF19Q5SWL8 479 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 XRRA1Q6P2D8 792 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 ARRDC4Q8NCT1 418 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PDCD2LQ9BRP1 358 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 TSEN34Q9BSV6 310 aaKnown RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 GLT8D2Q9H1C3 349 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 BARHL2Q9NY43 387 aa13.31□□□□□ -0.28
SPIDR-212ENST00000519661 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
SPIDR-212ENST00000519661 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-212ENST00000519661 PFKFB2O60825 505 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 CAPN15O75808 1086 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 STAM2O75886 525 aa13.3□□□□□ -0.28
SPIDR-212ENST00000519661 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
SPIDR-212ENST00000519661 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms