RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 FOXQ1Q9C009 403 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 HOMER2Q9NSB8 354 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 G3BP2Q9UN86 482 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 ATP8A1Q9Y2Q0 1164 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 ZNF142P52746 1687 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 ADAMTSL3P82987 1691 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 CDK12Q9NYV4 1490 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 ITSN1Q15811 1721 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 TERTO14746 1132 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 PPM1BO75688 479 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 ASPAP45381 313 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 CDKN1CP49918 316 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 RNF4P78317 190 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 ODR4Q5SWX8 454 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 C20orf194Q5TEA3 1177 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 ARMCX6Q7L4S7 300 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 NME9Q86XW9 330 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 JAMLQ86YT9 394 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 SCUBE1Q8IWY4 988 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 SMYD4Q8IYR2 804 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 WHRNQ9P202 907 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 SFMBT1Q9UHJ3 866 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 MCM8Q9UJA3 840 aa6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-212ENST00000518919 OVOS2A0A0J9YW53 1432 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 OVOS2Q6IE36 1432 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 AATKQ6ZMQ8 1374 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 A0A087X0B3 334 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 NOP56O00567 594 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 PRODHO43272 600 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 KCNQ2O43526 872 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 LRIG2O94898 1065 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 TIAF1O95411 115 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 SLURP2P0DP57 97 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 FGFR1P11362 822 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 ITGA4P13612 1032 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 DRD2P14416 443 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 CCDC181Q5TID7 509 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 TCP11L2Q8N4U5 519 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 CRACR2BQ8N4Y2 399 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 C12orf50Q8NA57 414 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 ADCY4Q8NFM4 1077 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 JDP2Q8WYK2 163 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 CCDC136Q96JN2 1154 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 PLEKHF1Q96S99 279 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 FAM126AQ9BYI3 521 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 ACTL7BQ9Y614 415 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 USP6P35125 1406 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 SSH2Q76I76 1423 aa6.08□□□□□ -1.44
CTNNA1-212ENST00000518919 GSG1L2A8MUP6 293 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 CELA2BP08218 269 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 U2AF1L5P0DN76 240 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 PABPC1P11940 636 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 EVA1CP58658 441 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 NFKB2Q00653 900 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 U2AF1Q01081 240 aaKnown RBP eCLIP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 HSP90AB2PQ58FF8 381 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 NBPF12Q5TAG4 269 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 ANKRD34AQ69YU3 496 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 CNNM4Q6P4Q7 775 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 NSMFQ6X4W1 530 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 RNF180Q86T96 592 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 UBR7Q8N806 425 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 MFSD2AQ8NA29 543 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 BVESQ8NE79 360 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 CLUHP3Q96NS8 147 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 MIPEPQ99797 713 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 TARS2Q9BW92 718 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 MRPL18Q9H0U6 180 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 GSX1Q9H4S2 264 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 FAM105AQ9NUU6 356 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 CHPF2Q9P2E5 772 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 MAGEC2Q9UBF1 373 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 POLKQ9UBT6 870 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 MAPRE3Q9UPY8 281 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 ZNF451Q9Y4E5 1061 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 NALCNQ8IZF0 1738 aa6.07□□□□□ -1.44
CTNNA1-212ENST00000518919 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 TBX1O43435 398 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 RAB6AP20340 208 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 CD247P20963 164 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 FBLN1P23142 703 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 MAP7Q14244 749 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 WWC2Q6AWC2 1192 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 LYPD4Q6UWN0 246 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 LRRTM3Q86VH5 581 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 WDR63Q8IWG1 891 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 ZNF513Q8N8E2 541 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 C2CD4AQ8NCU7 369 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 DNAJB8Q8NHS0 232 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 NEDD1Q8NHV4 660 aa6.06□□□□□ -1.44
CTNNA1-212ENST00000518919 PPP1R13LQ8WUF5 828 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms