RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 SH3RF1Q7Z6J0 888 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 CACTINQ8WUQ7 758 aaKnown RBP12.12□□□□□ -0.47
SPIDR-204ENST00000517824 LRRC27Q9C0I9 530 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-204ENST00000517824 MYH11P35749 1972 aa12.12□□□□□ -0.47
SPIDR-204ENST00000517824 UQCRHLA0A096LP55 91 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 IQCA1LA6NCM1 817 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 USP17L10C9JJH3 530 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 PSMA7O14818 248 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 ABCB7O75027 752 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 UQCRHP07919 91 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 SLC16A2P36021 539 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 ASIC1P78348 528 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 E2F4Q16254 413 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 ZNF658Q5TYW1 1059 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-204ENST00000517824 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 STAMQ92783 540 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 TMEM260Q9NX78 707 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
SPIDR-204ENST00000517824 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 CLRN2A0PK11 232 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 PSMD14O00487 310 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-204ENST00000517824 GH2P01242 217 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 PLCG1P19174 1290 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 TXKP42681 527 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 STX17P56962 302 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 UBE2SQ16763 222 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 QRICH1Q2TAL8 776 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 KRT79Q5XKE5 535 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 VSTM4Q8IW00 320 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 C4orf32Q8N8J7 132 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 JDP2Q8WYK2 163 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 C16orf45Q96MC5 204 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-204ENST00000517824 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-204ENST00000517824 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
SPIDR-204ENST00000517824 RWDD2AQ9UIY3 292 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 ZNRF3Q9ULT6 936 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 PCDHA1Q9Y5I3 950 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 PCDHAC2Q9Y5I4 1007 aa12.1□□□□□ -0.47
SPIDR-204ENST00000517824 BICDL2A1A5D9 508 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 SPDYE3A6NKU9 549 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 YDJCA8MPS7 323 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 FZD9O00144 591 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 BMP3P12645 472 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 TECP42680 631 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPIDR-204ENST00000517824 AP3B2Q13367 1082 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 CUL4BQ13620 913 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 IL17AQ16552 155 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 FAM114A1Q8IWE2 563 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 AGBL3Q8NEM8 1001 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
SPIDR-204ENST00000517824 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 MKL1Q969V6 931 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 GMCL1Q96IK5 515 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 PLIN2Q99541 437 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
SPIDR-204ENST00000517824 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-204ENST00000517824 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 NDUFB10O96000 172 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 TNNT1P13805 278 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 BMP6P22004 513 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 CASP1P29466 404 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-204ENST00000517824 DSG3P32926 999 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
SPIDR-204ENST00000517824 CCZ1BP86790 482 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 CCZ1P86791 482 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-204ENST00000517824 KCNB1Q14721 858 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 TNIP1Q15025 636 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 SPECC1LQ69YQ0 1117 aa12.08□□□□□ -0.48
SPIDR-204ENST00000517824 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms