RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 AARSP49588 968 aaKnown RBP eCLIP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 ATP2C1P98194 919 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 ATP11AP98196 1134 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 PARP10Q53GL7 1025 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CDKAL1Q5VV42 579 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 RPAINQ86UA6 219 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CADPS2Q86UW7 1296 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 DNAJC10Q8IXB1 793 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 LCORLQ8N3X6 602 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 MMGT1Q8N4V1 131 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 SPATA4Q8NEY3 305 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 NFU1Q9UMS0 254 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 RIPOR2Q9Y4F9 1068 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 ANKRD62A6NC57 917 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 KRIT1O00522 736 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 PRKAB2O43741 272 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 SARSP49591 514 aaKnown RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 ERVK-24P63145 666 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 EHHADHQ08426 723 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CUL1Q13616 776 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 SCARF1Q14162 830 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 PPP1R7Q15435 360 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 INF2Q27J81 1249 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 SLC4A8Q2Y0W8 1093 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 DYMQ7RTS9 669 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 MYOCDQ8IZQ8 938 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 RNF10Q8N5U6 811 aaKnown RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CNOT10Q9H9A5 744 aaKnown RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 ARPP21Q9UBL0 812 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CDHR2Q9BYE9 1310 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 LOC102724159A0A0B4J2E5 919 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 PWP2Q15269 919 aaKnown RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 DAAM2Q86T65 1068 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 CCDC197Q8NCU1 140 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 RIN2Q8WYP3 895 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-203ENST00000517490 MTUS1Q9ULD2 1270 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 DIP2AQ14689 1571 aa7.34□□□□□ -1.23
CPNE3-203ENST00000517490 TRIM49BA6NDI0 452 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 USP17L12C9JPN9 530 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 USP17L21D6R901 530 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.24
CPNE3-203ENST00000517490 KCNB1Q14721 858 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 PAPD7Q5XG87 772 aaKnown RBP7.34□□□□□ -1.24
CPNE3-203ENST00000517490 DENND2CQ68D51 928 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 NLRP14Q86W24 1093 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 GPIHBP1Q8IV16 184 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 FOXP4Q8IVH2 680 aaPredicted RBP7.34□□□□□ -1.24
CPNE3-203ENST00000517490 SUGP1Q8IWZ8 645 aaKnown RBP7.34□□□□□ -1.24
CPNE3-203ENST00000517490 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 PBKQ96KB5 322 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 NDST4Q9H3R1 872 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.24
CPNE3-203ENST00000517490 SLC39A2Q9NP94 309 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 FAM114A2Q9NRY5 505 aa7.34□□□□□ -1.24
CPNE3-203ENST00000517490 NEBLO76041 1014 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 RFX1P22670 979 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TNNI2P48788 182 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CALCOCO2Q13137 446 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 BIRC3Q13489 604 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CALCRLQ16602 461 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TMTC3Q6ZXV5 915 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 USP49Q70CQ1 688 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TTLL11Q8NHH1 800 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 FBF1Q8TES7 1133 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF512BQ96KM6 892 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 EPN3Q9H201 632 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 RIC8AQ9NPQ8 531 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 INTS13Q9NVM9 706 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 GRID2IPA4D2P6 1211 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 RGS16O15492 202 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 HNRNPH1P31943 449 aaKnown RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 POLR2FP61218 127 aaKnown RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 GRIN1Q05586 938 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 FAM47AQ5JRC9 791 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PAF1Q8N7H5 531 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CTNNBL1Q8WYA6 563 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 P3H4Q92791 437 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 N4BP2L2Q92802 583 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 EEF2KMTQ96G04 330 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 ATP6V1G3Q96LB4 118 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 LRRC1Q9BTT6 524 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CXorf56Q9H5V9 222 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TRIM10Q9UDY6 481 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PARP2Q9UGN5 583 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 BZW2Q9Y6E2 419 aaKnown RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 SIGLEC1Q9BZZ2 1709 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 COL15A1P39059 1388 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC169A6NNP5 214 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PPP1R37O75864 691 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 SERPING1P05155 500 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 SRGNP10124 158 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 BCAMP50895 628 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 FBXW10Q5XX13 1052 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PACS2Q86VP3 889 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TMEM139Q8IV31 216 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms