RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SYTL5Q8TDW5 730 aaPredicted RBP16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 PIGSQ96S52 555 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 AMNQ9BXJ7 453 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 MRPL11Q9Y3B7 192 aaKnown RBP16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 DDAH1O94760 285 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 SMPD1P17405 629 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 GJA9P57773 515 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 PRO3102Q9H379 93 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 GNEQ9Y223 722 aaKnown RBP16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
PDGFRB-202ENST00000517488 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 A0A1W2PQ45 241 aaPredicted RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 A0A1W2PQY0 241 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 OPLAHO14841 1288 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 CTAGE5O15320 804 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 RXRAP19793 462 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 EDNRBP24530 442 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 LIFRP42702 1097 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 ACLYP53396 1101 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 SNX17Q15036 470 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 KCNA10Q16322 511 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 MCF2L2Q86YR7 1114 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 DNERQ8NFT8 737 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 TCEANC2Q96MN5 208 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 TSEN34Q9BSV6 310 aaKnown RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 ATP11BQ9Y2G3 1177 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 FRMPD3Q5JV73 1810 aa16.37■□□□□ 0.21
PDGFRB-202ENST00000517488 CST5P28325 142 aaPredicted RBP16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 PDE4DQ08499 809 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 TRIM60Q495X7 471 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 DHX32Q7L7V1 743 aaKnown RBP16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 KCNB2Q92953 911 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 MAF1Q9H063 256 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 ALPK3Q96L96 1907 aa16.36■□□□□ 0.21
PDGFRB-202ENST00000517488 MCM3APO60318 1980 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 TRIOBPQ9H2D6 2365 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 PNMA6FA0A0J9YX94 578 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 CFBP00751 764 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 KIF5BP33176 963 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 NKX3-2P78367 333 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 BEX3Q00994 111 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 TLK2Q86UE8 772 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 CMTR1Q8N1G2 835 aaKnown RBP16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
PDGFRB-202ENST00000517488 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 MOXD2PA6NHM9 499 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 ASGR1P07306 291 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 CPA1P15085 419 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 HSPA4P34932 840 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 MAGEA10P43363 369 aaPredicted RBP16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 HSD17B4P51659 736 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 GHRHRQ02643 423 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 KRT32Q14532 448 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 PCSK9Q8NBP7 692 aaKnown RBP16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 RMDN3Q96TC7 470 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 GDF15Q99988 308 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 WDR11Q9BZH6 1224 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 AP5M1Q9H0R1 490 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 STARD7Q9NQZ5 370 aa16.34■□□□□ 0.21
PDGFRB-202ENST00000517488 LCTP09848 1927 aa16.33■□□□□ 0.21
PDGFRB-202ENST00000517488 CALM1P0DP23 149 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 CALM2P0DP24 149 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 CALM3P0DP25 149 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 GNAQP50148 359 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 TLE2Q04725 743 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 DUSP28Q4G0W2 176 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
PDGFRB-202ENST00000517488 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms