RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 AFF2P51816 1311 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 ADAMTSL3P82987 1691 aa11.96□□□□□ -0.49
PCDHGA1-202ENST00000517417 SASH3O75995 380 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 LIG3P49916 1009 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 TNNC1P63316 161 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 SLC9C1Q4G0N8 1177 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 PRR16Q569H4 304 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 IFIH1Q9BYX4 1025 aaKnown RBP11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRIM31Q9BZY9 425 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 RWDD2AQ9UIY3 292 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZRANB2O95218 330 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 CDC25AP30304 524 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 HLFQ16534 295 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 PPP1R14CQ8TAE6 165 aa11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC97Q96F63 343 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA1-202ENST00000517417 DNM2P50570 870 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SRLQ86TD4 932 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 FERMT1Q9BQL6 677 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC77Q9BR77 488 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 CEP83Q9Y592 693 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SEMA3EO15041 775 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SRGAP2O75044 1071 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 KLHL30Q0D2K2 578 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 PPP1R7Q15435 360 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 USP49Q70CQ1 688 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 C2CD5Q86YS7 1000 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TTLL11Q8NHH1 800 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SELENOSQ9BQE4 189 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SUGCTQ9HAC7 445 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 FAM208AQ9UK61 1670 aaKnown RBP11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 ATP2B4P23634 1241 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 C2orf54Q08AI8 447 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TCP11X2Q5H9J9 407 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC84Q86UT8 332 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 WDR44Q5JSH3 913 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZNF354CQ86Y25 554 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 POTEDQ86YR6 584 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 FBXO41Q8TF61 875 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 MAP3K14Q99558 947 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
PCDHGA1-202ENST00000517417 ASIC2Q16515 512 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 B4GALNT4Q76KP1 1039 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC114Q96M63 670 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 EFCC1Q9HA90 598 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 CALCOCO2Q13137 446 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 RASGRF1Q13972 1273 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 RSRC2Q7L4I2 434 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRIM58Q8NG06 486 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 IGDCC4Q8TDY8 1250 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 EIF3CQ99613 913 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 ATP8A2Q9NTI2 1148 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 SRP68Q9UHB9 627 aaKnown RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 H3BQF6 201 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRIM37O94972 964 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 HSPA1LP34931 641 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 SUSD4Q5VX71 490 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 UBLCP1Q8WVY7 318 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 PNKPQ96T60 521 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 GDAQ9Y2T3 454 aa11.94□□□□□ -0.5
PCDHGA1-202ENST00000517417 GAS7O60861 476 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 PPFIA4O75335 1185 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 MAGEA9P43362 315 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 CYP4A11Q02928 519 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 CUL4BQ13620 913 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 VWA3BQ502W6 1294 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 RASGRP2Q7LDG7 609 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 GSPT2Q8IYD1 628 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 ATP2A1O14983 1001 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 CALUO43852 315 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 CEP104O60308 925 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 IFT20Q8IY31 132 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 EFCAB13Q8IY85 973 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 IFT74Q96LB3 600 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 NOX5Q96PH1 765 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 ADD3Q9UEY8 706 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 MTUS1Q9ULD2 1270 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms